LOC122323790


Basic Information

Item Value
gene id LOC122323790
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12112991 ~ 12113745 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247061.1
TTGAGTGTTGGAGAGGAAAGGCTGGAAGACCGACTGGAAGTTTTCACTGTCCTGCTGTAAAAGTATGGGTCAGTTAATTAAACatctgccctctgctggccaGGTATTGAACACTCAGCTAAAATATtctgaaagacaagGGTGCCGAGATAAGACAGTGATACaaataaaagactaaaacaacagaaaaagagcaagagGAAGAATAAAGATGAGCCAGGAAAGAGAGACTGGACGATGGTGCCGTTGGGAAGGAGCAACATTTTAGTGAAGATCATTCTGTGGCTGACAGTCTCTGTCTCTGATTTCAAATGTACTTTGAAATCacacaataaaactaaacaatgttagaaaataacaatataataatgacatttgtGTATAGATAGGTACAAGAAATGATGAtatgattacaataaaattgtgatgaattaataaagaaagaatgaataaataaaaagaaagaaaatgaaacataattGTTTGGTGACTCTCTTTCATCAACTCACTTTTAATCCACATAAGTCTACGAAGAAGACGCTtaataaagaagaaataaaaatagaaaatatattatctCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247061.1 True 583 lncRNA 0.34 3 12112991 12113745

Neighbor

gene id symbol gene type direction distance location
LOC122323873 NA coding upstream 2164 12109556 ~ 12110827 (+)
LOC122323773 NA coding upstream 14093 12097091 ~ 12098898 (+)
LOC122323872 NA coding upstream 28160 12081248 ~ 12084831 (+)
LOC122323780 NA coding upstream 35161 12076581 ~ 12077830 (+)
LOC122323766 NA coding upstream 42135 12068332 ~ 12070856 (+)
LOC122323874 NA coding downstream 2785 12116530 ~ 12118582 (+)
LOC122323779 NA coding downstream 4747 12118492 ~ 12119894 (+)
sfpq LOC107722137,LOC107669930,LOC107566770,LOC107706594,LOC107558579,LOC107655760 coding downstream 7650 12121395 ~ 12139784 (+)
LOC122323754 zmym4,LOC107669919,LOC107566774,LOC107655758,LOC107706586 coding downstream 32008 12145753 ~ 12163878 (+)
LOC122323753 LOC107566772,LOC107722138,LOC107655757,LOC107706592 coding downstream 51340 12165085 ~ 12184252 (+)
LOC122323789 NA non-coding upstream 6321 12105788 ~ 12106670 (+)
LOC122323793 NA non-coding upstream 9178 12103312 ~ 12103813 (+)
LOC122323788 NA non-coding upstream 19761 12091760 ~ 12093230 (+)
LOC122323796 NA non-coding upstream 22443 12090085 ~ 12090548 (+)
LOC122323792 NA non-coding upstream 27038 12085020 ~ 12085953 (+)
G132305 NA non-coding downstream 1014 12114759 ~ 12115354 (+)
G132311 NA non-coding downstream 76993 12190738 ~ 12192364 (+)
G132301 NA non-coding downstream 83932 12197677 ~ 12199695 (+)
G132318 NA non-coding downstream 133799 12247544 ~ 12247745 (+)
G132317 NA non-coding downstream 135026 12248771 ~ 12249423 (+)
LOC122323774 NA other upstream 94 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 589110 11522229 ~ 11523881 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other upstream 1694895 10415640 ~ 10418096 (+)
triqk triqk,LOC107724370,LOC107710222,LOC107702072 other upstream 2359435 9734220 ~ 9753556 (+)
G131801 trib1,LOC107724318,LOC107565192,LOC107702074,LOC107710180,LOC107556392,LOC107653840 other upstream 2474030 9636973 ~ 9638961 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other downstream 309545 12423290 ~ 12425078 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other downstream 907672 13021417 ~ 13026026 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other downstream 1195682 13309427 ~ 13336749 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 2673799 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 2720856 14834601 ~ 14837969 (+)

Expression


Co-expression Network