LOC122324219


Basic Information

Item Value
gene id LOC122324219
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 6255006 ~ 6263954 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247115.1
GATTCAAATACATAACCAGTGAGCGTTTAAAACTATCGCCTTACTTTAGGCCGGTTCACAACGGCTTGTTAATTTGAGCGGTACGGTTTTCGCGGGAAATTCGAGCACGGCGCGGCGTCATTACGTCTTGTCCgtaaacacaaaagaagcagTCCCGCCAATTCTACACTACAGCTGCAGATTTTCAGAAGGTGTCTCTCAAGGATGCTGAAAACCACACAATGCAGTGGGACAGACATTTACAGCCAAGAGTCACCCGCCGTGCCGATATGTCTACAAATGCCTGAAAAGAGTACAAGCATGTGTCTAAAAAGggACCTGGTAAAGGTGCTCCGAGGGGAAACAGAGCAAGAAAGAGAGTTAGGAAAAGGGAGAGGGAGTCGAGAGTTTCCTCCCACGTACACACGCAGGAAGTCACTGCTGAGCTGATACAAAGCGTCATTACAGGGCTGACTTATCCGTGCCGAGGTTTAAAGGCCAGTGACCAAAGACCACAAAAAAGGATGAGAGATCACTCCAAACATCAAACATCCTGGAAACACAGAGGGAGGAAGCAGTTTCATTAGGCCATGAAGAATccagaccaaaacaaaacaagcaagaaCAGTTTGTGCGTATTTTTTCTGCGCACAGGAATGTGTGTAGGCTGTTccgttttttttcaaatagtgaTTACATACATCTTTGGGAAAGCACACTCGTGTTGGTTTGTAACTGAGAAAAGAACTTTGAATGTGGAGGATTTATTGGAGTTTGAACTCCTAAGTTTGAGTGAGTAATACAGAAGAACGTAGGAGAAAAGGAGGAGAGGGAAGAGATGAGAGGAGGTTACCCGTAATAACAACCCTGCAAATGCTAAAAAGAGAGAGGCTGTGTTCTAAACAGTGTACTGTGCAGTATATAGTGCATTTTAAGTGTAGTGTGTGAAAACCAATGCATTAcgcaaagcatttttaaaaagagatgCAATTTGCTCATGTTAAAATTACACCTTTGAAAGCAAAATCGATCGTCtttgaaaattatgaaatgCTATTATTCGTAATGtaatcattaatatttgatgTTATACAACCTTAGGATGTCGATCGCGTTTACACACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247115.1 True 1104 lncRNA 0.42 5 6255006 6263954

Neighbor

gene id symbol gene type direction distance location
mylipa mylipa,LOC107754815,LOC107694366,LOC107584315,LOC107731572 coding upstream 2667 6234025 ~ 6252339 (+)
jarid2b jarid2b,LOC107754814,LOC107694367,LOC107702394,LOC107731546 coding upstream 92463 6061549 ~ 6162543 (+)
LOC122323385 sdhaf3,LOC107702681 coding upstream 372032 5876050 ~ 5882974 (+)
col28a1a col28a1,LOC107754784 coding upstream 515821 5725368 ~ 5739185 (+)
rpa3 rpa3,LOC107754810,LOC107598208,LOC107672835,LOC107731561,LOC107702426,LOC107568286 coding upstream 537325 5716696 ~ 5717681 (+)
npr1a npr1a,npr1,LOC107694365,LOC107677481,LOC107754786,LOC107731544,LOC108435512 coding downstream 2429 6266383 ~ 6344260 (+)
ints3 ints3,LOC107754816,LOC107584314,LOC107731564,LOC107694364,LOC107677482 coding downstream 82835 6346789 ~ 6361192 (+)
gon4la LOC107754817,LOC107694363,LOC107584344 coding downstream 101564 6365518 ~ 6377599 (+)
LOC122323487 LOC107694355,LOC107754822,LOC107595588,LOC107711322 coding downstream 171278 6435232 ~ 6443128 (+)
nelfe nelfe,LOC107754803,LOC107584366,LOC107694353,LOC107677468,LOC107595590,LOC107711324 coding downstream 209655 6473609 ~ 6477150 (+)
G130944 NA non-coding upstream 26919 6227746 ~ 6228087 (+)
G130940 NA non-coding upstream 85647 6167626 ~ 6169359 (+)
G130893 NA non-coding upstream 301536 5923032 ~ 5953470 (+)
G130899 NA non-coding upstream 320289 5798511 ~ 5934717 (+)
G130891 asns,LOC107754811,LOC107672863,LOC107731557,LOC107702657 non-coding upstream 322164 5930852 ~ 5932842 (+)
G130950 NA non-coding downstream 67711 6331665 ~ 6334244 (+)
G131010 NA non-coding downstream 128962 6392916 ~ 6393957 (+)
G131016 LOC107677454,LOC107595587,LOC107584310,LOC107694359,LOC107754821 non-coding downstream 141431 6405385 ~ 6409741 (+)
G131093 LOC107694325,LOC107711328,LOC107754828,LOC107584304,LOC107677461,LOC107595615 non-coding downstream 374527 6638481 ~ 6639229 (+)
G131241 NA non-coding downstream 692615 6956569 ~ 6956786 (+)
LOC122323983 tac1,LOC107702667,LOC107731560,LOC107754813,LOC107672864 other upstream 332033 5785130 ~ 5922973 (+)
LOC122323254 sdhaf3,LOC107702681 other upstream 502089 5745801 ~ 5752917 (+)
LOC122324139 LOC107598234,LOC107672810 other upstream 669351 5583505 ~ 5585655 (+)
G130640 txnipa,txnip,LOC108410889,LOC107672857,LOC107738596 other upstream 940828 5223700 ~ 5314178 (+)
pdia8 zgc:100906,LOC107754821,LOC107584310,LOC107694359,LOC107711320,LOC107595587,LOC107754819,LOC107584312,LOC107694360,LOC107711304 other downstream 107881 6371835 ~ 6401298 (+)
G131047 LOC107584307,LOC107694350,LOC107711327,LOC107677453,LOC107595591 other downstream 199129 6463083 ~ 6488760 (+)
G131042 gabbr1b,LOC107595614,LOC107677456,LOC107584305 other downstream 255966 6519920 ~ 6526080 (+)
ppp1r11 ppp1r11,LOC107595604,LOC107694341,LOC107711309,LOC107677477 other downstream 428020 6691974 ~ 6696204 (+)
G131183 NA other downstream 569915 6833869 ~ 6836858 (+)

Expression


Co-expression Network