LOC122324249


Basic Information

Item Value
gene id LOC122324249
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 13305006 ~ 13305144 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247120.1
tGCAGTCGTGTCAAATTCAGTGTTTCCTTTTCAGTGGACCACACTGGCCAAAATGGCTGCAACAGTGAACAAGTAGTCTATGGGCCCCATGTTCTTCTATAAAATAAGTCCTGGGGATAGAAAAAGTCTACAAACATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247120.1 True 139 snoRNA 0.43 1 13305006 13305144

Neighbor

gene id symbol gene type direction distance location
nkain1 nkain1,LOC107593567,LOC107670117,LOC107591671,LOC107696573 coding upstream 15272 13284661 ~ 13289734 (+)
snrnp40 snrnp40,LOC107593559,LOC107591625,LOC107696518 coding upstream 21274 13279531 ~ 13283732 (+)
fabp3 LOC107669374,LOC107593560,LOC107591627,LOC107696578,LOC107742844 coding upstream 28432 13274022 ~ 13276574 (+)
arpp21 arpp21,LOC107593556,LOC107706187,LOC107669332,LOC107742849,LOC107696582 coding upstream 49027 13245298 ~ 13255979 (+)
LOC122324206 pdcd6ip,LOC107669307,LOC107593555,LOC107706184,LOC107742851,LOC107591619,LOC107696546 coding upstream 64279 13228815 ~ 13240727 (+)
LOC122323742 LOC107706194,LOC107593565,LOC107696547,LOC107591672,LOC107742864,LOC107697044 coding downstream 33920 13339064 ~ 13345446 (+)
LOC122323745 LOC107742873,LOC107706196,LOC107591673,LOC107593593,LOC107696571,LOC107697046 coding downstream 40447 13345591 ~ 13350048 (+)
matn1 matn1,LOC107697056,LOC107742840,LOC107696557,LOC107706195,LOC107593568,LOC107591630 coding downstream 45056 13350200 ~ 13358487 (+)
sesn2 sesn2,LOC107697045,LOC107593595,LOC107706154,LOC107696562,LOC107578469 coding downstream 54496 13359640 ~ 13364878 (+)
yrk yrk,fgr,LOC107706197,LOC107593569,LOC107697055,LOC106515751,LOC107696553,LOC107742837,LOC107591631 coding downstream 60808 13365952 ~ 13382526 (+)
G132549 NA non-coding upstream 178389 13125877 ~ 13126617 (+)
G132547 LOC107591615,LOC107696587,LOC107731336,LOC107696584,LOC107552275 non-coding upstream 181040 13118716 ~ 13123966 (+)
G132541 psmb4,LOC107593590,LOC107669568,LOC107706179 non-coding upstream 202081 13101949 ~ 13102925 (+)
G132498 LOC107593576,LOC107731729,LOC107706171,LOC107696598 non-coding upstream 439411 12786644 ~ 12865595 (+)
G132755 klhl43,LOC107706211,LOC107589442,LOC107742826,LOC107696549,LOC107591641 non-coding downstream 206464 13511608 ~ 13512971 (+)
G132754 klhl43,LOC107589442,LOC107706211,LOC107742826,LOC107591641,LOC107696549,LOC108426671 non-coding downstream 207878 13513022 ~ 13513896 (+)
G132773 NA non-coding downstream 249867 13555011 ~ 13556679 (+)
G132774 NA non-coding downstream 256023 13561167 ~ 13561445 (+)
G132884 NA non-coding downstream 541638 13846782 ~ 13848115 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other upstream 278980 13021417 ~ 13026026 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other upstream 879928 12423290 ~ 12425078 (+)
LOC122323774 NA other upstream 1192109 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 1781125 11522229 ~ 11523881 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other upstream 2886910 10415640 ~ 10418096 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other downstream 4283 13309427 ~ 13336749 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 1482400 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 1529457 14834601 ~ 14837969 (+)
LOC122323518 LOC107654743,LOC107688368,LOC107602377,LOC108413484,LOC107706254,LOC107710329 other downstream 1773310 15078454 ~ 15192566 (+)
LOC122323314 LOC107602378,LOC107591987,LOC107706255,LOC107710332,LOC107688367,LOC107654747 other downstream 2003583 15308727 ~ 15313877 (+)

Expression


Co-expression Network