trnap-agg_22


Basic Information

Item Value
gene id trnap-agg_22
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 15385195 ~ 15385266 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2196
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2196 True 72 tRNA 0.61 1 15385195 15385266

Neighbor

gene id symbol gene type direction distance location
rpl14 rpl14,LOC107710319,LOC107688416,LOC107654689,LOC107706260 coding downstream 6533 15376637 ~ 15378662 (-)
LOC122324119 NA coding downstream 22377 15360926 ~ 15362818 (-)
LOC122323517 ppce,LOC107654745,LOC107710331,LOC107602379,LOC108259106 coding downstream 92594 15280429 ~ 15292601 (-)
c19h1orf109 LOC107688373,LOC107754259,LOC107592951,LOC107654741,LOC107591985 coding downstream 426695 14956900 ~ 14958500 (-)
LOC122323565 clspn,LOC107706248,LOC107654737,LOC107754255 coding downstream 450126 14925718 ~ 14935069 (-)
trak1b LOC107591988,LOC107710336,LOC107654751,LOC107688362,LOC107706145 coding upstream 40935 15426201 ~ 15439451 (-)
LOC122324175 cfap44,LOC107706146,LOC107580614,LOC107688389 coding upstream 54089 15439355 ~ 15454526 (-)
dync1li1 dync1li1,LOC107591989,LOC107654754,LOC107706262,LOC107688360,LOC107710339 coding upstream 112331 15497597 ~ 15509297 (-)
cspg5b LOC107748647,LOC107591995,LOC107710343,LOC107688356,LOC107602387,LOC107654760 coding upstream 173247 15558513 ~ 15577238 (-)
smarcc1b smarcc1b,LOC107748646,LOC107654761,LOC107688355,LOC107710344 coding upstream 193358 15578624 ~ 15587712 (-)
G133226 NA non-coding downstream 1080 15383847 ~ 15384115 (-)
G133190 LOC107654743,LOC107706254 non-coding downstream 107792 15190805 ~ 15277403 (-)
G133143 NA non-coding downstream 547242 14836460 ~ 14837953 (-)
G133144 NA non-coding downstream 549334 14835452 ~ 14835861 (-)
G133016 rbm24a,LOC107696536,LOC107592929,LOC107706227,LOC107754275,LOC107654717,LOC107591968 non-coding downstream 956373 14403518 ~ 14428822 (-)
G133313 NA non-coding upstream 28709 15413975 ~ 15424498 (-)
G133315 NA non-coding upstream 95066 15480332 ~ 15481202 (-)
G133361 NA non-coding upstream 240059 15625325 ~ 15626280 (-)
G133370 LOC107710351,LOC107688346 non-coding upstream 286916 15672182 ~ 15673003 (-)
G133375 NA non-coding upstream 295819 15681085 ~ 15681626 (-)
G133217 NA other downstream 15459 15366434 ~ 15369736 (-)
zgc:114119 LOC107654731,LOC107688423,LOC107706242,LOC107754290,LOC107592983 other downstream 493277 14887528 ~ 14891918 (-)
G133132 NA other downstream 600772 14784188 ~ 14784423 (-)
G132785 NA other downstream 1876742 13507664 ~ 13508453 (-)
G132784 eef1a1l1,eef1a1l2,LOC107742828,LOC100526699,LOC107696583,LOC107589443,LOC107706208,LOC107654700,LOC107696561,LOC102296947,LOC101482897,LOC102205261,LOC108247920,LOC107706209,LOC107589444,LOC107654701,LOC108426655,LOC108256978,LOC107591637,LOC107742829,LOC105892153,LOC108426629 other downstream 1882825 13494830 ~ 13502370 (-)
LOC122323308 LOC107748748,LOC107592064,LOC107710321,LOC107688414,LOC107602392 other upstream 259596 15644862 ~ 15648579 (-)
G133373 LOC107748749,LOC107592092,LOC107654694,LOC107710322,LOC107688413,LOC107602391 other upstream 274653 15659919 ~ 15660720 (-)
evx1 evx1,LOC107688412,LOC107602371,LOC107710323,LOC107654696,LOC107748750,LOC107592093 other upstream 351681 15736947 ~ 15740329 (-)
npy LOC107592012,LOC107748754,LOC107656665,LOC107688404 other upstream 536957 15922223 ~ 15924285 (-)
mbpa mbpa,tshz1,LOC107563706,LOC107748691,LOC107592027,LOC107739558,LOC107696938,LOC107688322,LOC107593600,LOC107592029,LOC107696978,LOC107739556,LOC108429099 other upstream 895691 16280957 ~ 16508595 (-)

Expression


Co-expression Network