LOC122324113


Basic Information

Item Value
gene id LOC122324113
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 16896108 ~ 16897143 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2202
CTGCTTCAGTGCTCTTAAGGTCTTTCTAGACCTTTGACTTTATGATTTTATGACTGACAGCTCTTCTTCATGATAGCAGATCCTAAAGCAAACATGACTTTAATAGCCATCGTTATTTGGACACTCACAACCTGCATCTGCAGTTCTTTGGGGCAGGTTCTGACTCAGTCTGAAGATCAAGCAGTGAAGCCTGATCAGACTGTCACTATTAACTGTAACCATAATCCAgctgtaaaatgtgttaaaaaagatACCTCTCAGAAATGCATGTCCTGGTATCATCAGATTCCTGGAGAACCTCCTAAACCCCTGATATATTACACATCAGACAGAGCTTCAGGTGTTTCTTCTAGATTCAGTGGCAGTGAAAGTGGAAACCACATGGATTTTActctgaccatcagtggagtccagCCTGAAGATTCAGGAgtttattactgtcagagtaaACATGACAAGGGAGTCTCTGGCACCACAGACTGGGTGTTCACACAGTGTGAAATCATCATACAAAAACCTCCTCAGCTTTGAGCTTCTGCAGATGTTGATGCTGAAGATAATTATTGTCCTCACTgacttcacacacaaacacacacataaacagagaTTCTTTAAGCATGCAGTtgattttcattattgtttcGCACTCCTCAACACAttctacatattttattaacaataaacatCAGAATGGATCTCAGTGAGGCTTCCACATGAATCCAGTGATCGCTATGAATGAGATTTAAATGAACTCTTTGTATTATGGAATTAGCCAGTCCTGTCCGAAGCACTTGCAGATGGTATAAAATGCTGTCGCTATGCTGTTGACCGGCAGATGAAGGTTCGATCGCTTTAAACTGACAACCAATTGAGTATTAAATCGTTACAGAAGCCTGTTCCAAGAACAATTCTACTAGAGCCTTAA

Function

GO: NA

KEGG:

id description
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2202 True 925 V_gene_segment 0.40 2 16896108 16897143

Neighbor

gene id symbol gene type direction distance location
nudcd1 nudcd1,LOC107697115,LOC107563704,LOC107739547,LOC107748703 coding downstream 64361 16814826 ~ 16831747 (-)
LOC122323461 LOC107592103,LOC107697214,LOC107656599,LOC107748761,LOC107563715,LOC107739630,LOC100537369 coding downstream 99588 16793249 ~ 16796520 (-)
eif3eb eif3eb,LOC107748702,LOC107592037,LOC107656637,LOC101483159,LOC108249253 coding downstream 112883 16774625 ~ 16783225 (-)
pleca LOC107748698,LOC107697034 coding downstream 123978 16686125 ~ 16772130 (-)
eppk1 eppk1,LOC107656638,LOC107748699,LOC107697067,LOC107739550,LOC107592034 coding downstream 214778 16667962 ~ 16681330 (-)
grb10a grb10a,LOC107667783,LOC107739542,LOC107565574,LOC108440880,LOC107656633,LOC108273075,LOC105905327 coding upstream 4627 16901770 ~ 16944523 (-)
si:ch73-109i22.2 LOC107748764,LOC107667791,LOC107739537,LOC107656629,LOC107599558,LOC107579479,LOC107565563 coding upstream 62008 16959151 ~ 16966115 (-)
msmp2 si:ch1073-70f20.1,LOC107748766,LOC107565577,LOC107693399,LOC107656628,LOC107599557 coding upstream 144832 17041975 ~ 17042989 (-)
si:ch73-347e22.8 NA coding upstream 151396 17048539 ~ 17051619 (-)
si:ch73-347e22.4 LOC107693273,LOC107748715,LOC107565585,LOC107739595 coding upstream 175188 17072331 ~ 17083543 (-)
LOC122323645 NA non-coding downstream 13696 16867857 ~ 16882412 (-)
LOC122323643 NA non-coding downstream 28756 16854238 ~ 16867352 (-)
G133812 NA non-coding downstream 196201 16699689 ~ 16699907 (-)
G133783 NA non-coding downstream 293572 16571601 ~ 16602536 (-)
G133775 sall3,sall3b,LOC107696994,LOC107592031,LOC107739555,LOC107656642,LOC107563697 non-coding downstream 334132 16560106 ~ 16561976 (-)
G133856 si:dkey-240h12.4,LOC107599596,LOC108440884,LOC107565569,LOC107748765,LOC107739598,LOC107656625,LOC107667793 non-coding upstream 76363 16973506 ~ 16978942 (-)
G133865 NA non-coding upstream 76888 16974031 ~ 17041793 (-)
G133852 NA non-coding upstream 120394 17017537 ~ 17020967 (-)
G133879 NA non-coding upstream 126103 17023246 ~ 17024514 (-)
G133886 NA non-coding upstream 158958 17056101 ~ 17056311 (-)
LOC122324112 NA other downstream 3527 16891692 ~ 16892581 (-)
LOC122324114 NA other downstream 5234 16889829 ~ 16890874 (-)
G133842 NA other downstream 9108 16886460 ~ 16887000 (-)
LOC122323321 NA other downstream 12628 16882987 ~ 16883480 (-)
G133834 pkhd1l1,LOC107592039,LOC107748704,LOC107739541,LOC107656576,LOC107563710 other downstream 26544 16856979 ~ 16869564 (-)
LOC122324115 NA other upstream 852 16897995 ~ 16898601 (-)
trnap-ugg_15 NA other upstream 3562 16900705 ~ 16900776 (-)
LOC122323474 LOC107589464,LOC107589461,LOC107656564,LOC107739585,LOC107599573,LOC107656565,LOC107739586,LOC107599590,LOC107693268,LOC107739622,LOC107589465,LOC107724065,LOC107656563 other upstream 316818 17213961 ~ 17218790 (-)
G133949 NA other upstream 386189 17283332 ~ 17284744 (-)
G133948 LOC107693373,LOC107724108,LOC107739520,LOC107599537 other upstream 433554 17330697 ~ 17334234 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014751 BX571825.12 non-coding NC_007130.7 CM002903.2 23128663 ~ 23129301 (-)