G135226


Basic Information

Item Value
gene id G135226
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 1007146 ~ 1069889 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU199795
GGTTATGTAAACACTTTATTTGTATACTTTCCCAACATAAGTCATTTAAACTACAGGAGCAGTAAAACCATAATGCAGAGGAAAGgggcaaaaaaaaccaaaaataaatacaaagcatGAAAACAGACtccaatcaaaataaatgctgtatttgaTTTGTACATGAAACCTCCAGATGAAAGCCAGGGTGTATTTACACAAAGCTATGAACAGCAGTCTCCCTCGCACACCGCCTCACGTTTATCATGGCAATCGACATCATTCGCAGCGAATAAAAGGCATTTTACAAAATCGAAACATAAAAAAGGAGGATGAAATGACAGGCGACTGTATAAAAGGCATGGTCAGAGCCTAATAAATATCCAGGGTTCAGTAAGAGACACAAGAGCCACCGACTGGAGTAATATTAGCAGGTGAGGAGGATCGCTGCAGAGAGAGTGGTTACGCACTGACAGAAGCCTCTGAAGACCAGCTGGACCTGTCCTGAGTGTCAGGAGCTCAGACGAGAGCACGGCCGGCGCAGCGGGACAGCGCTCAGGACACATCTGAGGagcagagaacacacacacacgcacacacacacagagacacacacagagacacacacagagacacacacacacagagacacacacacacacacacacacacacacacacagacagagacacacacacagacagagacacacacacacagacagagacacacacacacagacagagacacacacacacagacagagacacacacacacagacagagacacacacacagagacagacagacagacacacacacacacacacacacacacacacacacacacacacagagggattCTCACGGTCCAGAAACGTCCCTCACAAGAGCAGAGTGATATTCTGCAGTCCTCCTAACACACACAGCGTCCTGAGAAACATCACGACAGATATGTGGGTCAGTGGAGCAGCAGAGCCCCTTCAGATGAAGATCGGAGCGCTGCGGGCCAGAGGACGGAGAACACTGATCTTCATGCTCTCTCTGAAGACACACCGAACGCTGCCTTTCACAACCACCGGCCAGAACAACATTACTGTAACTCTCAGCTTTATATCTGGTTACTTTTAATGAGAAACAAAGTCTACTCCTGAAAATCTTTCAAggaattcaaacaataaatgctgtataataataaatcatcatcAGTACTATATTCAactcaaaataaacatgaatcaaTCTCTCACTCAATCAGTGTTTCACCTGCAGAAGGACGTCAATAAAACGCTGTCGGGagcattttatgttatgttgGCATTATGAAACT
>TU199796
GGTTATGTAAACACTTTATTTGTATACTTTCCCAACATAAGTCATTTAAACTACAGGAGCAGTAAAACCATAATGCAGAGGAAAGgggcaaaaaaaaccaaaaataaatacaaagcatGAAAACAGACtccaatcaaaataaatgctgtatttgaTTTGTACATGAAACCTCCAGATGAAAGCCAGGGTGTATTTACACAAAGCTATGAACAGCAGTCTCCCTCGCACACCGCCTCACGTTTATCATGGCAATCGACATCATTCGCAGCGAATAAAAGGCATTTTACAAAATCGAAACATAAAAAAGGAGGATGAAATGACAGGCGACTGTATAAAAGGCATGGTCAGAGCCTAATAAATATCCAGGGTTCAGTAAGAGACACAAGAGCCACCGACTGGAGTAATATTAGCAGGTGAGGAGGATCGCTGCAGAGAGAGTGGTTACGCACTGACAGAAGCCTCTGAAGACCAGCTGGACCTGTCCTGAGTGTCAGGAGCTCAGACGAGAGCACGGCCGGCGCAGCGGGACAGCGCTCAGGACACATCTGAGGagcagagaacacacacacacgcacacacacacagagacacacacacacacacgctccgtCAAACACCAGGATCAAAGCCTGCTCGCCGCtcataaatgaaagattttaaattactttgtgAACATCTGAGTCAcgtgacaaaataaaataaataatattttagaactCCTAGGCCTTCATCACAGTATCAGTAGAGTTAAAGCACTAAAGTCAATGGACAGATGTGAGTTTAACGGtcaatatttaacatatacTCTTCATATATACACTGATACTACACCACGCATGTTATCCTTCATTCACTGTGTAATATCATCTGACCAAAGTGATCGTCATGAGCAGCATAATCAGAATGATTTAAAGTGATCTTTAttatgatttagatttttcttgtGTCATATTTGCTATGACTAACCTCCTGTTGTTCAGTCATTGCTCCAAAGGCTATAGTCTATAGTCATCCTTTTAGCTTATCATGAAACCTCTTCCTTGGTTTTGCAATAATTATAGATTGTAAATTGAgtgctgtatttaaataatcataatcaaatttttttttacagtactatTTGTAACATCCACTTTTTTTGCAAGCAGAAGCATGATAAAGGCctattcattttaagttaaattatgCTAGGCATGTCGTCTGctagaaagttaaaaatattaagtgttaagtagttgtttttttaaatagttttacaaatgattttagtttttcaagAAAGCCAAAATGGCCTTTTTATAGtcatttcatttatacattgGTGTAAAAGACTCGggcaaaaaaacacatctgtgtTGTTGGGTTTGGGCCCAGGGTCATCTCTAAAGGACAGGCACCGAAGAGCTCATACGTACAGCTGGCCGGCTGCTCTCCGAACCGCCTCATCAGCTGGTCGTGGGTGAACTTCACGAAAGCATCGTACTGTTCTGCAAAGCCAAGAAGAACAGGTCAAACACAGGAAGGCCTCCGCAGGCAGCACACGTGGTGTTTGTGGACAGATACCTGCGAGTTTGGTGGTCAGGATCTCGTCGTACTCCTCGCGCACCTTCTCCTCGCGCTCCTTCAGCAGACGCTCACAGATCATGCCCACCTGCTTCAGCGTGAAGAGAGGCTGCTCGCGTCTGGAGGGGGAGGCCGACCCTGGAGAGCACAGCGAGAGCAGCACCTCAGTACAGAATCACAACACACTGCACCAACCATAACAGGAGTGTATTGACCATggttaaaagaaaacacattctcctgttcattcatgtttatttgtgctttaAAGGAGTCAGCAGTGGAGAGTGTGTGTTGATGGAACAGTGAAGCTGTGTGATGATGGAacggtgaaggtgtgtgatggtggaacggtggaGGTGTGTGGAacggtgtgtgatggtggaacggtgtgtgatggtggaacggtggaggtgtgtgatggtggaacggtggaggtgtgtgatggtggaacggtggaggtgtgtgatggtggaacggtggaGGGTGTGTG

Function

GO:

id name namespace
GO:0019221 cytokine-mediated signaling pathway biological_process
GO:0071345 cellular response to cytokine stimulus biological_process
GO:0034097 response to cytokine biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199795 False 1309 lncRNA 0.45 2 1007146 1069889
TU199796 True 2056 lncRNA 0.43 2 1067667 1069889

Neighbor

gene id symbol gene type direction distance location
med23 med23 coding downstream 102055 867719 ~ 905091 (-)
arhgap18 arhgap18,LOC107660538,LOC107740524,LOC107653144,LOC107560483 coding downstream 368590 613675 ~ 638556 (-)
si:dkey-126h10.1 si:dkey-126h10.1,LOC107757668,LOC107653135 coding downstream 548280 451877 ~ 458866 (-)
ptprk LOC107653136,LOC106607755,LOC106571353 coding downstream 578249 295938 ~ 428897 (-)
themis themis,LOC107653154,LOC107757674,LOC107740538,LOC107660546,LOC107554148,LOC107576180 coding downstream 711343 287735 ~ 295803 (-)
slc35a1 slc35a1,LOC107709883,LOC107675061 coding upstream 11186 1081075 ~ 1087580 (-)
LOC122325202 btbd9,LOC107688314 coding upstream 70761 1140650 ~ 1146850 (-)
LOC122324370 LOC107688317,LOC107708306,LOC107697512,LOC107572741 coding upstream 84175 1154064 ~ 1160381 (-)
zgc:112001 NA coding upstream 92787 1162676 ~ 1164732 (-)
lrfn2b lrfn2b,lrfn2,LOC107563150,LOC107697513,LOC107708309,LOC107688310,LOC107558970,LOC108443927 coding upstream 99907 1169796 ~ 1223016 (-)
G135234 NA non-coding downstream 82637 924266 ~ 924509 (-)
G135232 NA non-coding downstream 85268 921445 ~ 921878 (-)
G135218 NA non-coding downstream 88900 917428 ~ 918246 (-)
G135214 NA non-coding downstream 143264 863647 ~ 863882 (-)
G135202 NA non-coding downstream 241912 764744 ~ 765234 (-)
G135277 NA non-coding upstream 36888 1106777 ~ 1107104 (-)
G135225 slc16a10,LOC107563131 non-coding upstream 57403 1127292 ~ 1130076 (-)
G135297 NA non-coding upstream 168071 1237960 ~ 1238160 (-)
G135323 NA non-coding upstream 217203 1287092 ~ 1287309 (-)
G135339 NA non-coding upstream 343914 1413803 ~ 1422222 (-)
G135237 NA other downstream 41751 938165 ~ 965395 (-)
epb41l2 epb41l2,LOC107717037,LOC107560489,LOC107697498,LOC107653142,LOC100380760,LOC107711607 other downstream 184636 753567 ~ 822510 (-)
tmem244 tmem244 other downstream 356789 643571 ~ 650357 (-)
G135276 NA other upstream 32816 1102705 ~ 1103113 (-)
G135275 NA other upstream 33417 1103306 ~ 1105818 (-)
G135279 NA other upstream 40536 1110425 ~ 1110861 (-)
pcmt pcmt,pcmt1,LOC107660522,LOC107742992,LOC107550534 other upstream 476598 1546487 ~ 1571699 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other upstream 585207 1655096 ~ 1660536 (-)

Expression


Co-expression Network