G135339


Basic Information

Item Value
gene id G135339
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 1413803 ~ 1422222 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU199938
GGActttaaggcttgcaaagattgcgctgtcgattgcaagcgggagagaagcaggtttctccttaacctccctttttcctccagacggatcacagtccgcctgaggccgggggccgggcaggcctccgccttctgcctccttccctgctttgcatcccccctgctttgcctccgccgctttgcctcctccgaagctcagcttgcaagtcactttatttatagaggaaaggacaagatacagtaaatgaaaacaattggccacatttcttgtgcgtcagaatcttcactccttcagattcttccggtggccctatcagtattctacggaggccatgttatgaccaagaatcaaactgaaactaaaaggccacaggtgcataactgtcaacatttaactccaacattccgttctcatcaggctgacaaagcctggcacccgatggaagctgtaactgaaggatcaaagttgcaaaatgtcaatacataaccctaacactGtgtctctctctctctgtctctctctctctctctctctctctctctctctctctctct

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU199938 True 555 lncRNA 0.49 3 1413803 1422222

Neighbor

gene id symbol gene type direction distance location
tab2 tab2,LOC107739913 coding downstream 102148 1293218 ~ 1311655 (-)
lrfn2b lrfn2b,lrfn2,LOC107563150,LOC107697513,LOC107708309,LOC107688310,LOC107558970,LOC108443927 coding downstream 190787 1169796 ~ 1223016 (-)
zgc:112001 NA coding downstream 249071 1162676 ~ 1164732 (-)
LOC122324370 LOC107688317,LOC107708306,LOC107697512,LOC107572741 coding downstream 253422 1154064 ~ 1160381 (-)
LOC122325202 btbd9,LOC107688314 coding downstream 266953 1140650 ~ 1146850 (-)
trnag-ucc_6 NA coding upstream 30876 1453098 ~ 1453168 (-)
LOC122325578 NA coding upstream 31408 1453630 ~ 1453745 (-)
trnag-ucc_7 NA coding upstream 33112 1455334 ~ 1455405 (-)
LOC122325579 NA coding upstream 33641 1455863 ~ 1455978 (-)
trnag-ucc_8 NA coding upstream 34632 1456854 ~ 1456925 (-)
G135323 NA non-coding downstream 126494 1287092 ~ 1287309 (-)
G135297 NA non-coding downstream 175643 1237960 ~ 1238160 (-)
G135225 slc16a10,LOC107563131 non-coding downstream 283727 1127292 ~ 1130076 (-)
G135277 NA non-coding downstream 306699 1106777 ~ 1107104 (-)
G135226 NA non-coding downstream 343914 1007146 ~ 1069889 (-)
G135365 LOC107554153,LOC107660512,LOC107731522,LOC107742993,LOC107550541,LOC107678325 non-coding upstream 130889 1553111 ~ 1555177 (-)
G135368 NA non-coding upstream 133046 1555268 ~ 1557577 (-)
G135382 lats1,LOC107554921,LOC107742997,LOC107660506,LOC107550539,LOC107678322 non-coding upstream 167241 1589463 ~ 1591235 (-)
G135384 NA non-coding upstream 187326 1609548 ~ 1610205 (-)
G135389 NA non-coding upstream 207830 1630052 ~ 1630329 (-)
G135279 NA other downstream 302942 1110425 ~ 1110861 (-)
G135275 NA other downstream 307985 1103306 ~ 1105818 (-)
G135276 NA other downstream 310690 1102705 ~ 1103113 (-)
G135237 NA other downstream 448408 938165 ~ 965395 (-)
epb41l2 epb41l2,LOC107717037,LOC107560489,LOC107697498,LOC107653142,LOC100380760,LOC107711607 other downstream 591293 753567 ~ 822510 (-)
pcmt pcmt,pcmt1,LOC107660522,LOC107742992,LOC107550534 other upstream 124265 1546487 ~ 1571699 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other upstream 232874 1655096 ~ 1660536 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other upstream 417906 1840128 ~ 1876292 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other upstream 583327 2005549 ~ 2013527 (-)
G135548 NA other upstream 941831 2364053 ~ 2364824 (-)

Expression


Co-expression Network