G135368


Basic Information

Item Value
gene id G135368
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 1555268 ~ 1557577 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU199993
ttttattaatatttttttaaatcaagtttttgtccaattaaaaaaacttttgtaatcATCCGGTAATTAAccagttgtaaaaaaaaacagtaattacATTAACTAAAGCTGTATTCCCTGGACTGAGATTATAATGAACTCAAGCATATGATCATACAAGGATGCAGAGACAAAGTGGTTTTAAGGGGTCATCAGATGCAAAATCCACTTTTCAAGTTGTTTGAACATGAATGCGTGTTGGAGGTTTGTGTACACATCCACCCTAAAATGATGAAAATCCacccagtgtttttttaaatccatgttttaaaatgccttttcacAAATCAGTCTGATTCCTGTCAGAatcacaggcccctcccacgatAGTTGATTGACAAGGCCTTTGTCCCGCCCTCAGCGAGCTGTCATCAGTCATCTGTCATTGAGACGAATCGGAAGACGAGAATGTCTCTGATTAAGTGACTGAGGTGTTTTGTTGTTAGATGTAATCATATAGCAGTTGGCATTTACATCTGAGCTGCTGAAGAAGCAAAGGACTAATGCTACTTTCGTTCTGAAGGGAACGCAACGATCCCCGATCTACAGAAATGTAACTATATTTGTGCAAAGTATTTGTGATCCAGCTTTatctacagaagaaaaaaaaatcccctttCCTAATATGTTCTAGTTAGCCAGTTTCGCCAGGGAaaagaggggcggggtcagcagagcttattagcatttaaagcaacatggactagaatggcttgatgaaaacagccgatttagtattttttaaacagttttatgaaACTATgatatagacttttcattaagactctcttcgacttgagaatCATATCAACTTGTGGAAAATGGGCATCACACGACCCCGTTAAAATGACTATCCTGTTAAGGCTGAGCacatttcttcagaaaaaataaactgaaaaatactcTCATTAAAGGGTCAAATTCCCAGGTCAAAATATCAGGCAAGCTTGTGGTGCATCATGCttcgttaaaaaaataaagctgaatcAATCCATATTCAATCACTTCAAAAACAAGTATATACTCTTAAGTACGCTTTAAGCCATTATGCCAGTATTTAGACATTATCAAATCATACAACTGCATTTTTATACCATAGAAACCTTTGTTGCAGTCACGCACATCTGTATAATTGCTACCAAAATAACTCCAACCAAAATAACCTTCAGATGCAATCTTCTTAGAAACAGCGTCCATTCACATGTTCTTTTCTAGTTAGTTAACTTAATTTGGCATACTATATAGGTGAGATACTTGTGTCATTTTGCACACAAGAAGATATAAATGGCATGAACGCTAACCACCGATCAGCAGATCAGTAATAGTCAACCCTGCTTTTGGAGAACAACAATAACTCCCTCCAAAGCTCCAACCCTgcgcaaaaaaaacccccatctGTGATTTTCAAGTCATTCTGAGCAGCCGTCTGTACGTTCTGACTTAAACGGGAACATAAAGTCCACACTTTTGGCTTATGAATCACTAACTAGTTTATAAATTAAGGCAGAATGTAGCTAGTATGTTATAAGCTCCCTGTAAAACGATATGTAGTCaatttatgatttttgtgttGCGGCCTtccaatttgtaaaaaaaaaaaaactgttgaaaCTTCTTTTACATCACATGACTAATTGTTGACACTGCAATATGattattcatgaaaataaacGTAACAGgcgttttatatttaaatgacattcataagctgtatttaaaaagtaataataataataataaataggtTTATTTCTGATATGACCGATTCCATTTAGATTCCAACATGGAGGGATGCACTGAAAACTCATTGAAATCCTAAGCATTAAAGTCTTCGCCAGGTGAAACATTAGCTTTCTAATGCAATTCTTTCAATCAGACGTTTTATTCTATGCATTTTGTCTGGTCGGAGAAAAATTTTACATCTAAAGTCAAGATTAATGAAATTTAGTGGCCCTTTATGTCCCAAACAGACTGTAACTTATGTAAGTTGGCCCCAGGAGCAGGGTTGACTAGCTGTGCGTAACTCATGCGTCTCTAACACAGTCACGCAAGCGGTGCAGCAGACTGGAGGGTTGATTGGCAGGTGACCGTTCTGCTACAGATACATGCCATTGATGAGGTAATCAGACTCTTCTGTGGTGAGAGGCAAAGCTTTCTTCAGTCTGCGACGTACAAGCCAGAGCCTGCAGCCCGCCATCAGTAAGAGCAGAACGCTGATGATCAGACCCAGAGCCAGGGGTAAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199993 True 2285 lncRNA 0.37 2 1555268 1557577

Neighbor

gene id symbol gene type direction distance location
LOC122325606 NA coding downstream 55781 1499378 ~ 1499487 (-)
LOC122325609 NA coding downstream 57296 1497862 ~ 1497972 (-)
LOC122325605 NA coding downstream 58826 1496331 ~ 1496442 (-)
LOC122325596 NA coding downstream 60353 1494802 ~ 1494915 (-)
trnag-ucc_26 NA coding downstream 60932 1494265 ~ 1494336 (-)
ankrd6b ankrd6,ankrd6b,LOC107562345,LOC107660530,LOC107731518,LOC107554922,LOC107742996 coding upstream 36153 1593730 ~ 1610790 (-)
nt5e nt5e,LOC107660511,LOC107554926,LOC107562347,LOC107680304 coding upstream 232459 1790036 ~ 1801963 (-)
mei4 mei4 coding upstream 250528 1808105 ~ 1819393 (-)
senp6a senp6,LOC107660507,LOC107707326,LOC107573984,LOC107680310 coding upstream 321745 1879322 ~ 1896773 (-)
nrl nrl,LOC107554929,LOC107680315,LOC107731521,LOC107707327,LOC107573986,LOC107660532 coding upstream 344785 1902362 ~ 1907463 (-)
G135365 LOC107554153,LOC107660512,LOC107731522,LOC107742993,LOC107550541,LOC107678325 non-coding downstream 91 1553111 ~ 1555177 (-)
G135339 NA non-coding downstream 133046 1413803 ~ 1422222 (-)
G135323 NA non-coding downstream 267959 1287092 ~ 1287309 (-)
G135297 NA non-coding downstream 317108 1237960 ~ 1238160 (-)
G135225 slc16a10,LOC107563131 non-coding downstream 425192 1127292 ~ 1130076 (-)
G135382 lats1,LOC107554921,LOC107742997,LOC107660506,LOC107550539,LOC107678322 non-coding upstream 31886 1589463 ~ 1591235 (-)
G135384 NA non-coding upstream 51971 1609548 ~ 1610205 (-)
G135389 NA non-coding upstream 72475 1630052 ~ 1630329 (-)
G135390 gabrr2b,LOC107554924,LOC107660528,LOC107731517,LOC107742989 non-coding upstream 77015 1634592 ~ 1635272 (-)
G135392 LOC107731517,LOC107660528,LOC107742989,LOC107562336,LOC107680313,LOC107554924 non-coding upstream 81967 1639544 ~ 1640129 (-)
G135279 NA other downstream 444407 1110425 ~ 1110861 (-)
G135275 NA other downstream 449450 1103306 ~ 1105818 (-)
G135276 NA other downstream 452155 1102705 ~ 1103113 (-)
G135237 NA other downstream 589873 938165 ~ 965395 (-)
epb41l2 epb41l2,LOC107717037,LOC107560489,LOC107697498,LOC107653142,LOC100380760,LOC107711607 other downstream 732758 753567 ~ 822510 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other upstream 97519 1655096 ~ 1660536 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other upstream 282551 1840128 ~ 1876292 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other upstream 447972 2005549 ~ 2013527 (-)
G135548 NA other upstream 806476 2364053 ~ 2364824 (-)
cep170bb LOC107670249,LOC107715684,LOC107714793,LOC107550527 other upstream 1182975 2740552 ~ 2757430 (-)

Expression


Co-expression Network