G135781


Basic Information

Item Value
gene id G135781
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2859267 ~ 3231374 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU200565
tttgaataaaaactatGTTCTTGGTTTGGGGGATCGGGATATTACTTTCAGCTCAGTTTAACATTTTgataatactgaaatatttgaattttatgaCACACCTAATAACACCAATAACAGGCATACCGTAAAATCCTGGCTGCTTTGCTGAGGAATATCTGCAGAAATCCTCTCTGAGGTAAGAGCGAAGAGGGCTAGGCTTTTCCAGACTCTCCTCATCTTCATTCACAGGGTTTTGGATGTGTGAACATAGGACAGGGGAACTGCAGAGATTTTGAAGACTGATGCCTGAGAAATCTTCACTCAGATCCATGTGGGCTCTATAGTCTTTCTGAAGGTGACTTCCAGAACTTTGAGGCAAGTAGAGACTGGGCAAGCCTGTAGCGCTCTCTGTGTGTTGTGACTCACTTATGGAAAGGTTGGTGAGGGGGCTTCCAGAACTTTGAGGCAAGTAGAGACTGGGCAAGCCTGTAGCGCTCTCTGTGTGTTGTGACTCACTTATGGAAAGGTTGGTGAGGGGGCTGACCCCTAAGTCTAGGGGTCTAGGGGGAGTAAGCCGATCTAGACAATCCAATCTACTTGCATCAGGAACACACATTTCTGGGATGAATCTACCCctttttcctgtgtttttaaGGGTATGTGATTGACACTGCTGGCAAGCAGGCCAGGCCAGATTGAGAGAAGACAAGGTCATAGACTCATCGGTTTCTACAGGCATACTAAGATGTGG

Function

GO:

id name namespace
GO:0004175 endopeptidase activity molecular_function
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200565 True 733 lncRNA 0.45 2 2859267 3231374

Neighbor

gene id symbol gene type direction distance location
rev3l rev3l,LOC107675651,LOC107705450,LOC107712405,LOC107676701,LOC107569208 coding downstream 10642 2787139 ~ 2848625 (-)
LOC122325188 LOC107714796,LOC107565462,LOC107670243,LOC107550532,LOC107676708,LOC107715681,LOC105017614,LOC106607890 coding downstream 80442 2761146 ~ 2778825 (-)
ndufaf7 ndufaf7,LOC107752688,LOC107670241 coding downstream 188412 2663778 ~ 2670855 (-)
lama4 lama4 coding downstream 227124 2596412 ~ 2632143 (-)
tube1 tube1,LOC107670257,LOC107703869 coding downstream 264471 2584067 ~ 2594796 (-)
LOC122324861 rhob,LOC107730407,LOC107704819,LOC107569216,LOC107549346,LOC107657220,LOC105907285,LOC103025336,LOC106607565 coding upstream 240620 3471994 ~ 3473405 (-)
tshr LOC107728338,LOC107549347,LOC107657214,LOC107681439,LOC107742823,LOC107569215 coding upstream 306499 3537873 ~ 3547204 (-)
trnat-ugu_52 NA coding upstream 1218009 4449383 ~ 4449455 (-)
tmem242 tmem242,LOC107560201,LOC107678668,LOC107679673,LOC107555301 coding upstream 1437305 4668679 ~ 4674148 (-)
lgals8a lgals8a,LOC107747965,LOC107678666,LOC107560204,LOC107679690 coding upstream 1464140 4695514 ~ 4705308 (-)
G135691 NA non-coding downstream 98383 2759097 ~ 2760884 (-)
G135674 LOC107715685,LOC107670242,LOC107714794 non-coding downstream 121378 2732603 ~ 2737889 (-)
G135658 marcks,LOC107709525,LOC107676707,LOC107570520,LOC107715691,LOC107670244 non-coding downstream 212186 2644181 ~ 2647081 (-)
G135629 NA non-coding downstream 279565 2579269 ~ 2579702 (-)
G135627 NA non-coding downstream 281779 2577132 ~ 2577488 (-)
G135819 NA non-coding upstream 155818 3387192 ~ 3387529 (-)
G135901 NA non-coding upstream 665828 3897202 ~ 3897582 (-)
G135910 NA non-coding upstream 758483 3989857 ~ 3990072 (-)
G135916 NA non-coding upstream 773463 4004837 ~ 4006307 (-)
G135918 NA non-coding upstream 775181 4006555 ~ 4007352 (-)
cep170bb LOC107670249,LOC107715684,LOC107714793,LOC107550527 other downstream 101837 2740552 ~ 2757430 (-)
G135548 NA other downstream 494443 2364053 ~ 2364824 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other downstream 845740 2005549 ~ 2013527 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other downstream 982975 1840128 ~ 1876292 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other downstream 1198731 1655096 ~ 1660536 (-)
nrxn3b nrxn3b,LOC107747953,LOC108410406,LOC106571678,LOC102203786,LOC101486071,LOC105017684 other upstream 406915 3638289 ~ 3870066 (-)
LOC122325550 NA other upstream 737389 3968763 ~ 3975258 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other upstream 1332982 4564356 ~ 4582097 (-)
si:ch73-111k22.3 LOC107742221 other upstream 1780007 5011381 ~ 5012580 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other upstream 1793432 5024806 ~ 5029567 (-)

Expression


Co-expression Network