G135800


Basic Information

Item Value
gene id G135800
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 3120341 ~ 3527057 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU200591
AACAGTTTAATCATACATAGTCACAattctgtttcaaaaaaaaaaaaagttattttctcaTCTAACATCTGGAAATGTACATAAGGCCACCTGAAAATGTACATGACTTTGACAGTGTGACAAAActcatatgttcatatttatataattgacAATATCTTACAATTACTTTGCTTACAAGTTAGTGGCTGCTCCAAAATACAGCACTcctttatacaaaaataattcttgCCCTGTCCTGTGAAATTTCCATGGCAGCAGGTAGAACCAAAGACAGCcccatgtttgtttgttttttttttaattcataaatttgtagttattttattcAACTGCCACATGTCAAAATGACCATGTTAACAGAAGTTGTCATTGCTCCAGGTACATAAAGAGGCTGACCTTTTCCAAgaactgattaaaaacaaaaccatcttGAGATTGTGACgcataaaaagttttttttttgcttttgtttttaaaataacgcTTGTTCCAAGAAAACTGTATACATTATATTCAAAGGGAAAGGAGTGATGAATATTACAcatcaaaatgcacatttttgatttttcttcCCCAAAAGTGTAAAAGACATTCCATTTACAGCGTTAACGTTTACAAATGTACAACTGtacagacaaaataaaagcaaatcactaTGCAATTTAGCAAGGCCTGTCCAACATCACGACTAGATTTTCTTCTATTTAACTAATAAACTTACACTTAATAACTCCACATATACTACATGTAttctacatttattcatatgaaGCAAAGGAACAAAAGCCATTAATATATTAGCCATACAGAAAAACTGTGCAGCAGAAGACGGCAACCCAAGTCCATTGTCTGAAAAGTATACTTTTGCACATTCTCAATCTACACTTCTGAATGCTGCACATTTGCTCCTACCCCGCAATGTCTCACGTTCATGAAATCAAATCTGTCCTACTTGCTCCAAAGCCAAACGTCCTTGGATGACTCCAAGGACAGGGACATCACCTACCAACTTCGCCTGCCCATGAGAGCATCATCTATAACCCAACTGCCGTCTTCCCCCACAcccaaaaaacagcaacaatttaatatttgtacttGTACATGAAGATGCTATACATTTTGCCTAAGCTATTACAATGTAAAGAGATGATAATCAGTCCATCCATACCATTTCTAGGCAgtgttcaaaaaacaaaaacaaaaaaaaaaacaactacaacagATGTTTCACAAacatgatgacaaaaaaaattatttcattaaaacattaaatccaGACACAGCATGCCAAATCTCTCTACTTCCTGCACACCTTGCATACCTCCCACgcaccctaaaataaaaaaataaaaaaatccatattttttCCATAACTAATATCTGGGTACAATGGCAGATGCACTGGTGTCCTTAAAATTCATTCGAAACAAGACAATAAGTGTGCAACAGACTTGGTCAGTGGGATGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200591 True 1473 lncRNA 0.34 2 3120341 3527057

Neighbor

gene id symbol gene type direction distance location
rev3l rev3l,LOC107675651,LOC107705450,LOC107712405,LOC107676701,LOC107569208 coding downstream 271716 2787139 ~ 2848625 (-)
LOC122325188 LOC107714796,LOC107565462,LOC107670243,LOC107550532,LOC107676708,LOC107715681,LOC105017614,LOC106607890 coding downstream 341516 2761146 ~ 2778825 (-)
ndufaf7 ndufaf7,LOC107752688,LOC107670241 coding downstream 449486 2663778 ~ 2670855 (-)
lama4 lama4 coding downstream 488198 2596412 ~ 2632143 (-)
tube1 tube1,LOC107670257,LOC107703869 coding downstream 525545 2584067 ~ 2594796 (-)
tshr LOC107728338,LOC107549347,LOC107657214,LOC107681439,LOC107742823,LOC107569215 coding upstream 10816 3537873 ~ 3547204 (-)
trnat-ugu_52 NA coding upstream 922326 4449383 ~ 4449455 (-)
tmem242 tmem242,LOC107560201,LOC107678668,LOC107679673,LOC107555301 coding upstream 1141622 4668679 ~ 4674148 (-)
lgals8a lgals8a,LOC107747965,LOC107678666,LOC107560204,LOC107679690 coding upstream 1168457 4695514 ~ 4705308 (-)
bcl11bb LOC107742200,LOC107678676,LOC107679682,LOC107560207,LOC107555305 coding upstream 1322322 4849379 ~ 4881627 (-)
G135691 NA non-coding downstream 359457 2759097 ~ 2760884 (-)
G135674 LOC107715685,LOC107670242,LOC107714794 non-coding downstream 382452 2732603 ~ 2737889 (-)
G135658 marcks,LOC107709525,LOC107676707,LOC107570520,LOC107715691,LOC107670244 non-coding downstream 473260 2644181 ~ 2647081 (-)
G135629 NA non-coding downstream 540639 2579269 ~ 2579702 (-)
G135627 NA non-coding downstream 542853 2577132 ~ 2577488 (-)
G135901 NA non-coding upstream 370145 3897202 ~ 3897582 (-)
G135910 NA non-coding upstream 462800 3989857 ~ 3990072 (-)
G135916 NA non-coding upstream 477780 4004837 ~ 4006307 (-)
G135918 NA non-coding upstream 479498 4006555 ~ 4007352 (-)
G135970 NA non-coding upstream 513366 4040423 ~ 4040768 (-)
cep170bb LOC107670249,LOC107715684,LOC107714793,LOC107550527 other downstream 362911 2740552 ~ 2757430 (-)
G135548 NA other downstream 755517 2364053 ~ 2364824 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other downstream 1106814 2005549 ~ 2013527 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other downstream 1244049 1840128 ~ 1876292 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other downstream 1459805 1655096 ~ 1660536 (-)
nrxn3b nrxn3b,LOC107747953,LOC108410406,LOC106571678,LOC102203786,LOC101486071,LOC105017684 other upstream 111232 3638289 ~ 3870066 (-)
LOC122325550 NA other upstream 441706 3968763 ~ 3975258 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other upstream 1037299 4564356 ~ 4582097 (-)
si:ch73-111k22.3 LOC107742221 other upstream 1484324 5011381 ~ 5012580 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other upstream 1497749 5024806 ~ 5029567 (-)

Expression


Co-expression Network