G136350 (LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109)


Basic Information

Item Value
gene id G136350
gene name LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5652299 ~ 5652925 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU201376
GCGCACACAGTCCATGCTGACCCTCGTAACGCAAAGTTTCTCTCCTGCACAGTTTCTGCACTTAGGTTTTCCTGGAGGTCCTCTGTGGGCGGAGCCTGCATGGGACTGGGGGTGTGGTTAGATTGGGTTGTGGCATTACTCTTGAGCCTGTCCTGAAGGTTTTGCAGGGTGTACACAGGCTCAGCTGGGTCTGAGGGTCCGGGGGACGTGATTTCATGGTAACCCTGTGTGTAAATGCTACAGAGCCGGAGCAGGTTCTGCTGGGCGTCATGTGGGAGGGGCTTATCCATGTCATTCAAAATCTGTCGCAGAAGGAACGGTGTAGCTGGGCATGGTGCGTTTACACATGTAGAAATCAGATTCTGCCATGGAAACTGTAATCTGTTTATGAAGATCCTTTCCTTGGACATTTTTAGTCGCTTGTGAGCCTTTAATTCACCTACCACACACATAGAGTTTGTTAAAAAGAAGTGAACAACTATGTTTTAAAGTttaagaaagcatttttaaaaccacGGGTCACAGTTACTAAACACCAAGCATGTGTGAAAT

Function

NR:

description
PREDICTED: ribosomal biogenesis protein LAS1L-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201376 True 552 lncRNA 0.47 2 5652299 5652925

Neighbor

gene id symbol gene type direction distance location
LOC122324749 msna,ezrb,LOC107685759,LOC107663223,LOC107557108,LOC107741191,LOC107597256,LOC107745284,LOC107549516,LOC107733309,LOC107659875 coding downstream 5392 5624200 ~ 5646907 (-)
trnal-caa_35 NA coding downstream 66376 5585812 ~ 5585923 (-)
trnal-caa_34 NA coding downstream 67898 5584290 ~ 5584401 (-)
trnal-caa_33 NA coding downstream 68911 5583277 ~ 5583388 (-)
trnal-caa_32 NA coding downstream 71447 5580741 ~ 5580852 (-)
LOC122324836 NA coding upstream 36458 5689383 ~ 5696894 (-)
trnal-caa_36 NA coding upstream 60583 5713508 ~ 5713619 (-)
trnal-uaa_30 NA coding upstream 115359 5768284 ~ 5768394 (-)
trnal-cag_33 NA coding upstream 133153 5786078 ~ 5786190 (-)
trnal-caa_37 NA coding upstream 138203 5791128 ~ 5791239 (-)
G136188 NA non-coding downstream 532533 5112173 ~ 5119766 (-)
G136180 NA non-coding downstream 555238 5091300 ~ 5097061 (-)
G136176 NA non-coding downstream 618495 5033599 ~ 5033804 (-)
G136175 NA non-coding downstream 633433 5018361 ~ 5018866 (-)
G136069 NA non-coding downstream 915493 4736549 ~ 4736806 (-)
G136356 NA non-coding upstream 48256 5701181 ~ 5701475 (-)
G136368 NA non-coding upstream 207028 5859953 ~ 5860623 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding upstream 396043 6048968 ~ 6050633 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding upstream 475573 6128498 ~ 6145661 (-)
G136416 NA non-coding upstream 552165 6205090 ~ 6205438 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other downstream 53633 5591338 ~ 5598666 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other downstream 292230 5161206 ~ 5360069 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other downstream 622732 5024806 ~ 5029567 (-)
si:ch73-111k22.3 LOC107742221 other downstream 639719 5011381 ~ 5012580 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other downstream 1070202 4564356 ~ 4582097 (-)
G136357 NA other upstream 48754 5701679 ~ 5703911 (-)
zpax2 NA other upstream 271141 5924066 ~ 5931122 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other upstream 621829 6274754 ~ 6302976 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other upstream 758037 6410962 ~ 6414013 (-)
LOC122324366 LOC107549545,LOC107582175,LOC108413331,LOC105929849 other upstream 779837 6432762 ~ 6451499 (-)

Expression


Co-expression Network