si:dkey-63b1.1 (si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507)


Basic Information

Item Value
gene id si:dkey-63b1.1
gene name si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 6410962 ~ 6414013 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU201658
GTTTTACTCAGGCGAAAGACAGCCAGAGCATGACAAACGGAAAGTGAGAACAGATCCAGGCTTCCAGTGACGACAGCCTCATTATGCGTTTATAAGAGCGCCTGTCTGATCTCACCAGCATCTAGTTGGAGAAGATTCAGCCAGACAACACTTTGGAAGTGAGCAGATAGTCATTCTGGATCTACAGTCTGGAGCTGACACTTAATATGAAAGTGCCCCAATGGAACTAAATTCAACAAACATCTGCAACGACACAGTCGCCTGGACATGGCTGTCATCTCTCCAGCCTCCGTTCTTGGCTCTTATCAGCATCCTGGGAGTGTTGGGCAACAGTCTGGTCCTCTGTGTGTTCTGCCTCCAGCGGAAGCCGTGCAGCGTGGCTGATGTGTATCTGGGCAACCTGGCAGCTGCAGACCTCATTATGGTCCTGTGTTTGCCCTTCTGGACGGTCACCATCGCCCAAGGCTTTCAGTGGAACTTCAGTCAGCTGCTCTGCAAGGTAATCTGCACCGCCATCTCCATGAACTACTACTGCAGCGTACTGTTCCTCACGCTGGTCAGCGTGGACCGCTACCTCGCCTTGGCCAAACCCATGAACCCCAGTAAGCTGAGATGCCCCAAACGGGCCAAGCGTATCTGTGCGGTGATCTGGATGGTGGG
>XM_043218837.1
AGTGAGAACAGATCCAGGCTTCCAGTGACGACAGCCTCATTATGCGTTTATAAGAGCGCCTGTCTGATCTCACCAGCATCTAGTTGGAGAAGATTCAGCCAGACAACACTTTGGAAGTGAGCAGATAGTCATTCTGGATCTACAGTCTGGAGCTGACACTTAATATGAAAGTGCCCCAATGGAACTAAATTCAACAAACATCTGCAACGACACAGTCGCCTGGACATGGCTGTCATCTCTCCAGCCTCCGTTCTTGGCTCTTATCAGCATCCTGGGAGTGTTGGGCAACAGTCTGGTCCTCTGTGTGTTCTGCCTCCAGCGGAAGCCGTGCAGCGTGGCTGATGTGTATCTGGGCAACCTGGCAGCTGCAGACCTCATTATGGTCCTGTGTTTGCCCTTCTGGACGGTCACCATCGCCCAAGGCTTTCAGTGGAACTTCAGTCAGCTGCTCTGCAAGGTAATCTGCACCGCCATCTCCATGAACTACTACTGCAGCGTACTGTTCCTCACGCTGGTCAGCGTGGACCGCTACCTCGCCTTGGCCAAACCCATGAACCCCAGTAAGCTGAGATGCCCCAAACGGGCCAAGCGTATCTGTGCGGTGATCTGGATGGTGGGATTGGTGCTCAGCCTCCCGACTCTGGTCTTCCGAAGAGTACGCTTCTTCCCGTTCATAGGGGTGGATGCCTGTTATCTAGAGTACCCACATCCGGCCTGGGTTCTCCAACGGAACATCACCACAAACGTCGTCGGGTTCCTGCTTCCGCTGCCCATCATTTCCCTTTGCACGTTTCATGTGGTCAAAGCGCTTAAAAACCGCGGCCTCGTGATTCAACCGAGGGTTCAAACGGAGAGGAAAGCCGCTAAGCTGGTTCTGACGGTCCTCGCCGTGTTTCTCCTGTGCTGGACGCCCTTTCAGCTGGTGCGGTTCCTAGACACCCTTGACTACTTTCGGCTCATTCCTGGGTGCCTCTGGGAGAATATATTGCAAATTAGCAACGAGCTGGCTACTTATTTAGGGTACAGCAATAGTGCAATAAACCCTTTTTTGTATGTTATCGTAGGGAGCCACTTCAGGAAGAGAGCTCATGGAGTTTTTCAAGGTCTTTTGTGCTCCAGACGCAAGAGCAATTCCTCGGTGCACttaaatgttactgttattagCAAGTGCGGTGACAGCCCTAAAGATAACAGAATAACACCGCTGGCTCTGAGAGCTGTATATCCACCCATCAAACCTCATATGGTGTGTAGATAgttgatgaagatgaagaagatcGGTTTGATTAGTATTTTGACGGTCCTTCAACAGGCATTCTGACTATAAGTGACTTTGCAGGTACCCAGGGCCAACTTTTTCTACTAACCCTGACTATAATCTAGCAATTCTCTAACTAGAGTTAGTTGTAGATTCAAAGTTACTTAATATGGTCTACAGAatagggaccatcaaaataaagcggAACCGTTTGATTCCCAGGAGACAGAATACCTCTTAATTGTCTGATTgtgcaatcttttttttttctttccttgcaTATGAAGAGTTTACTTGCAAAAACATCTAActtaataaatatctaaatatatatataaaaaaaacaattatcctTATTATTTATACGTAATCACCCAACTGCAGGTTAATtggtattaattaaaatgcacaataaaaaacctatctgtgaaaaaatgtaaaatgataaatgtttttgcaattcGTGTTTTCGTCTTTGTTGAAGTGTAGAAAGAATGAGTTATGAGAACCATGGAACTGGTGGAATAGTTTTGTGAGCTGTCATATGTCAAAGATTGTTTATGATTTTGCACTAAAATACTTCTGtatattttgtgattttctgtatgttgtatatttgatttgaatggTATTATTGTTATCTTTTACTGTTTCTTAAAACATTGAATTCCCActgctgtattattattattattttttacagaaccAAATGATTCAAAACCAAAGACTGTGAGCcatgcttatttttttagttattttatgcattttttaacattacacaatgtatttctttatgaacatgtatatttatgtatttatgtatatatgtgctgTAATACCTCACTTTGCTGTTGATGTAGCTgcttgaacattttaa

Function

symbol description
si:dkey-63b1.1 Predicted to enable bradykinin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction; smooth muscle contraction; and vasoconstriction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane.

NR:

description
PREDICTED: B2 bradykinin receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006939 smooth muscle contraction biological_process
GO:0006950 response to stress biological_process
GO:0042310 vasoconstriction biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004947 bradykinin receptor activity molecular_function

KEGG:

id description
K03916 BDKRB2; bradykinin receptor B2

RNA

RNA id representative length rna type GC content exon number start site end site
TU201658 False 660 TUCP 0.53 2 6412479 6414013
XM_043218837.1 True 2135 mRNA 0.42 2 6410962 6413971

Neighbor

gene id symbol gene type direction distance location
meis2b meis2b,LOC107664830,LOC107668148,LOC107582109,LOC107712444,LOC104938729,LOC105017579 coding downstream 42207 6350830 ~ 6368755 (-)
actc2 zgc:86709,actc1,ACTC1,actc1a,LOC108414322,LOC105024319 coding downstream 89683 6317799 ~ 6321279 (-)
gjd2b gjd2b,LOC107740303,LOC107582173,LOC107549543,LOC105892965,LOC107582146,LOC107712441 coding downstream 95148 6312330 ~ 6315814 (-)
cgrrf1 cgrrf1,LOC107740293,LOC107664817,LOC107712438,LOC107582104 coding downstream 153515 6254715 ~ 6257447 (-)
nid2b LOC107712413,LOC107549538,LOC107549503 coding downstream 178295 6218511 ~ 6232667 (-)
glrx5 glrx5,LOC107752683,LOC107664827,LOC107747371 coding upstream 53766 6467779 ~ 6470069 (-)
flrt2 flrt2,LOC107752686,LOC107664820,LOC107564782,LOC107701229,LOC107570088,LOC107706955 coding upstream 259217 6673230 ~ 6708654 (-)
LOC122325354 LOC107742115,LOC107664810 coding upstream 707338 7121351 ~ 7124683 (-)
LOC122325011 LOC107742110,LOC107581491,LOC107664824,LOC107658182 coding upstream 742254 7156267 ~ 7158619 (-)
LOC122325548 LOC107742115,LOC107664810 coding upstream 808623 7222636 ~ 7225982 (-)
G136506 NA non-coding downstream 12852 6383432 ~ 6398110 (-)
G136440 NA non-coding downstream 164071 6246263 ~ 6246891 (-)
G136416 NA non-coding downstream 205524 6205090 ~ 6205438 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding downstream 265301 6128498 ~ 6145661 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding downstream 360329 6048968 ~ 6050633 (-)
G136689 LOC107581525,LOC107742114,LOC107664807,LOC107658183,LOC107721806,LOC107597854,LOC107737069 non-coding upstream 713200 7127213 ~ 7130585 (-)
LOC122324389 NA non-coding upstream 719735 7133748 ~ 7139291 (-)
G136694 psma6b,psma6a,psma6,LOC107580710,LOC107664826,LOC107693094 non-coding upstream 737377 7151390 ~ 7151754 (-)
G136696 LOC108231735,LOC107396026,LOC107597861 non-coding upstream 738455 7152468 ~ 7251872 (-)
G136716 NA non-coding upstream 867359 7281372 ~ 7281804 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other downstream 107986 6274754 ~ 6302976 (-)
zpax2 NA other downstream 479840 5924066 ~ 5931122 (-)
G136357 NA other downstream 707051 5701679 ~ 5703911 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other downstream 812296 5591338 ~ 5598666 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other downstream 1050893 5161206 ~ 5360069 (-)
LOC122324366 LOC107549545,LOC107582175,LOC108413331,LOC105929849 other upstream 18749 6432762 ~ 6451499 (-)
G136688 NA other upstream 711735 7125748 ~ 7228963 (-)
G136707 NA other upstream 882848 7296861 ~ 7305724 (-)
LOC122324874 tmem30ab,LOC107721815,LOC107714749,LOC107658180,LOC107597847,LOC107664818,LOC107581488 other upstream 921375 7335388 ~ 7340455 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other upstream 1010823 7424836 ~ 7429282 (-)

Expression


Co-expression Network