G136696 (LOC108231735,LOC107396026,LOC107597861)


Basic Information

Item Value
gene id G136696
gene name LOC108231735,LOC107396026,LOC107597861
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 7152468 ~ 7251872 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU201914
GAAGCTGATATTTCCATTCCAGAGAACCGGTGCTATGCGGACTGGATAAAGATCTGCTAAACACCCTGGGGTGCTGACGTGGCACTTTTAGAGGCTTGAATTCATTTTGATAAAGCTGTAGCAAAGGTTTTGATGAATTCTGATTGTACCTCAACTGTCTGCTCAAAGGTCCAGTCGagtttctttttcacttttttctccAGAAAGCTTGTAGCCTCTGTCTGCTTGACACCTGCAGCCGTGGCCTTGAAGCCACAGTAATAACCCGCCGGGTCACACTTATACACCTGTGGCCCGAGCTCCTCATCTACACCAATCACAATCATGCCTGAAAAAGACAACGCATGAAAGCTACTTTGCATATTGGTTGTTTGTGTAAAACGTGCTGTGCAATgctgaaactaaataaataaataaataaataaaattaacacacacaca

Function

NR:

description
PREDICTED: proteasome subunit alpha type-6 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201914 True 441 lncRNA 0.43 2 7152468 7251872

Neighbor

gene id symbol gene type direction distance location
LOC122325354 LOC107742115,LOC107664810 coding downstream 27785 7121351 ~ 7124683 (-)
flrt2 flrt2,LOC107752686,LOC107664820,LOC107564782,LOC107701229,LOC107570088,LOC107706955 coding downstream 443814 6673230 ~ 6708654 (-)
glrx5 glrx5,LOC107752683,LOC107664827,LOC107747371 coding downstream 682399 6467779 ~ 6470069 (-)
meis2b meis2b,LOC107664830,LOC107668148,LOC107582109,LOC107712444,LOC104938729,LOC105017579 coding downstream 783713 6350830 ~ 6368755 (-)
actc2 zgc:86709,actc1,ACTC1,actc1a,LOC108414322,LOC105024319 coding downstream 831189 6317799 ~ 6321279 (-)
LOC122325143 LOC107742110,LOC107581491,LOC107664824,LOC107658182 coding upstream 3627 7255499 ~ 7257574 (-)
LOC122324872 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933 coding upstream 56838 7308710 ~ 7313322 (-)
LOC122324873 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 coding upstream 69784 7321656 ~ 7325677 (-)
nfkbiaa NA coding upstream 116439 7368311 ~ 7370195 (-)
LOC122325568 NA coding upstream 288253 7540125 ~ 7540240 (-)
G136694 psma6b,psma6a,psma6,LOC107580710,LOC107664826,LOC107693094 non-coding downstream 714 7151390 ~ 7151754 (-)
LOC122324389 NA non-coding downstream 13177 7133748 ~ 7139291 (-)
G136689 LOC107581525,LOC107742114,LOC107664807,LOC107658183,LOC107721806,LOC107597854,LOC107737069 non-coding downstream 21883 7127213 ~ 7130585 (-)
G136506 NA non-coding downstream 754358 6383432 ~ 6398110 (-)
G136440 NA non-coding downstream 905577 6246263 ~ 6246891 (-)
G136716 NA non-coding upstream 29500 7281372 ~ 7281804 (-)
G136717 NA non-coding upstream 108995 7360867 ~ 7396292 (-)
G136724 NA non-coding upstream 234021 7485893 ~ 7487411 (-)
G136758 NA non-coding upstream 329153 7581025 ~ 7652975 (-)
G136772 LOC107721802,LOC107712829,LOC107658155,LOC107669132 non-coding upstream 417708 7669580 ~ 7771831 (-)
LOC122324366 LOC107549545,LOC107582175,LOC108413331,LOC105929849 other downstream 700969 6432762 ~ 6451499 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other downstream 738455 6410962 ~ 6414013 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other downstream 849492 6274754 ~ 6302976 (-)
zpax2 NA other downstream 1221346 5924066 ~ 5931122 (-)
G136357 NA other downstream 1448557 5701679 ~ 5703911 (-)
G136707 NA other upstream 44989 7296861 ~ 7305724 (-)
LOC122324874 tmem30ab,LOC107721815,LOC107714749,LOC107658180,LOC107597847,LOC107664818,LOC107581488 other upstream 83516 7335388 ~ 7340455 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other upstream 172964 7424836 ~ 7429282 (-)
LOC122325222 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 other upstream 180188 7432060 ~ 7436498 (-)
LOC122324530 LOC107721814,LOC107597848,LOC107658179,LOC107712852,LOC107664819,LOC107581482 other upstream 292484 7544356 ~ 7601602 (-)

Expression


Co-expression Network