G136754 (zyg11b,zyg11,LOC107658153,LOC107712854,LOC107669142,LOC107721807)


Basic Information

Item Value
gene id G136754
gene name zyg11b,zyg11,LOC107658153,LOC107712854,LOC107669142,LOC107721807
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 7693955 ~ 7696065 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU202009
TTGTTTACTTGTCAAGACGTCGCTGCCGTTTCCTCCCGTTATAAAAACCCGTCAAAATGCCTGACAGCTCGTAGTGATCGGAGCACGTACGAACTGTCCGGTAGAAGAAATCCTCTAAACAACAATGCGGACGAGGAACAGAGGTTACAGTGGATTTATAGCGGCCCGTGTTCCTTTAAACACCGTCAAGTAGGATCTGCCGATGCTTGAAGACAGATGTTTGACGGCTGACGAGCTAAGGAGCTAAGAGCGTTTCAATCGGATTGTACCTATTTGATCTACACCTCAACCCACCTGCCATTATCCGCGGCATACAAGCGTCTCTTTCGCTGTGAGGCCGTTATGATCCATCTCTTCGAGACCATGgaCGAGGCTTCCCCGCCGTCTCTGACCGATCTGTGCATGACTCTGGTGAGCTCCAGGCTGGAGCTCTTCTGTGAGATGCGTGATGACGGCTCCCTCTCCTTCCGCGAGCCGCTGGTCTTCCCGCAGGAGCTGGCCGACCAACTGCTCTGCAAGATGGCCACTGAGGGCCTGTTGAATGACAGCACGGTGGGAATCTTCCGAAGCTGCCAGCAGTTCCGGTTGCGTCACGCCTGCATCCGCACCGCG

Function

symbol description
zyg11 Predicted to be part of Cul2-RING ubiquitin ligase complex. Is expressed in female organism. Orthologous to several human genes including ZYG11B (zyg-11 family member B, cell cycle regulator).
zyg11b Involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process and protein quality control for misfolded or incompletely synthesized proteins. Part of Cul2-RING ubiquitin ligase complex.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: protein zyg-11 homolog, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202009 True 612 TUCP 0.54 3 7693955 7696065

Neighbor

gene id symbol gene type direction distance location
LOC122324531 foxn3,LOC107680774,LOC107755777,LOC107751738,LOC107583483 coding downstream 73381 7608132 ~ 7620574 (-)
LOC122325568 NA coding downstream 153715 7540125 ~ 7540240 (-)
nfkbiaa NA coding downstream 323760 7368311 ~ 7370195 (-)
LOC122324873 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 coding downstream 368278 7321656 ~ 7325677 (-)
LOC122324872 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933 coding downstream 380633 7308710 ~ 7313322 (-)
angptl1a angptl1,angptl1a,LOC107669140,LOC107712858,LOC107658173,LOC107739855 coding upstream 160957 7857022 ~ 7874571 (-)
faslg LOC107581522,LOC107669138,LOC107712839 coding upstream 284614 7980679 ~ 7983050 (-)
si:dkey-86e18.1 LOC107739858,LOC107658158,LOC107597818,LOC102784436,LOC103354166,LOC102300794 coding upstream 289826 7985891 ~ 7992309 (-)
LOC122324580 si:dkey-86e18.2,LOC107658157,LOC107739861,LOC107597817 coding upstream 296532 7992597 ~ 7996438 (-)
jun jun,LOC107712863,LOC107581481,LOC107739852 coding upstream 302526 7998591 ~ 8000531 (-)
G136774 NA non-coding downstream 16912 7675943 ~ 7677043 (-)
G136758 NA non-coding downstream 40980 7581025 ~ 7652975 (-)
G136724 NA non-coding downstream 206544 7485893 ~ 7487411 (-)
G136717 NA non-coding downstream 297663 7360867 ~ 7396292 (-)
G136716 NA non-coding downstream 412151 7281372 ~ 7281804 (-)
G136792 NA non-coding upstream 194193 7890258 ~ 7893325 (-)
G136804 NA non-coding upstream 216083 7912148 ~ 7912564 (-)
LOC122325257 NA non-coding upstream 457600 8153665 ~ 8182659 (-)
G136909 NA non-coding upstream 506835 8202900 ~ 8207944 (-)
G136935 NA non-coding upstream 565018 8261083 ~ 8261292 (-)
LOC122324530 LOC107721814,LOC107597848,LOC107658179,LOC107712852,LOC107664819,LOC107581482 other downstream 92353 7544356 ~ 7601602 (-)
LOC122325222 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 other downstream 257457 7432060 ~ 7436498 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other downstream 264673 7424836 ~ 7429282 (-)
LOC122324874 tmem30ab,LOC107721815,LOC107714749,LOC107658180,LOC107597847,LOC107664818,LOC107581488 other downstream 353500 7335388 ~ 7340455 (-)
G136707 NA other downstream 388231 7296861 ~ 7305724 (-)
zyg11 zyg11,zyg11b,LOC107712854,LOC107669142,LOC107658153,LOC107721807 other upstream 89537 7785602 ~ 7799589 (-)
pigc pigc,LOC107581520,LOC107669155,LOC107712841,LOC107697628,LOC107597814 other upstream 627048 8323113 ~ 8644759 (-)
LOC122324857 mysm1,LOC107687344,LOC107581496,LOC107597795,LOC107697304 other upstream 895627 8591692 ~ 8600955 (-)
G137054 LOC107660256,LOC107566921 other upstream 1122789 8818854 ~ 8819327 (-)
G137056 NA other upstream 1125089 8821154 ~ 8821719 (-)

Expression


Co-expression Network