G137264 (adcy1a,LOC107559745,LOC107708029,LOC107697434,LOC107687179,LOC107581454,LOC107712833)


Basic Information

Item Value
gene id G137264
gene name adcy1a,LOC107559745,LOC107708029,LOC107697434,LOC107687179,LOC107581454,LOC107712833
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 9440237 ~ 9447911 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU202737
CtctcattgttattttattccCGAACAGTGCAAACACAAGTATAAAAGATCTCAATATGAAATTTACATTCACATAGAACcatcacaataaatacattgcaaccccaaaaatagcacaaatattacaaatcatCAATAAAATACTCTTTTAGTTTACtctacaatatatttaatacgtacaataattttgacccgtatcaaatatgaaaatatctaATCGACATGAAAATCTATTCTATGATTTTACTGTGCACACTTTATGcattaataaagttaatatatCATTAATGTTCATAACAGCAGTAAGTTAGGCCACTGTAGTCAAAATAGATCATATTAAGCCATATCAAATAGAACCATTTAGCTGTTTGGCTACATTTGTTGGATCATAGAATCTGAAATATTCAGTGATAACGATAAGCATTTTGGCATTTGGCATTcatattcattaaagaaaaaccaaaaatcTACATATATGAAACTCGAATGAACAGCTCCTTACTTTACGTTAATAAATATGCGTAATTCCTCACATGGCAAAATGAAGCTAAATGCAGCGGGAAACAGAATCGGAGAGAGCATTCCTGAATACGTAGCTTAACGCGAAGTAAACgtcgaaaaaataaaaaaaggaatagcCCATTTGCGAGTCGGTATTGAGCCCCACGTGGTACGATCACTCCGTATGAGAGTAAAAGTTCGCAACGGAACTGAATGCACGCAATAAATCGCAAAGTCGCGCTAGAAAGGAACACAGTTTGATATGTTGGTAACCGTACAGTATGCGTGTTGTTGGCACATATTCAAAAGAAACAGACTTTCTCCAACAGACCCTGGATAAAAAGGCAGTCACTTCAAGAGCTCGACAAGGCGCCAATGCTACAAAACTCCCAGAAAGCTTTCCCCACAGCACCACGCACGGACCAGGTAAGCAAATACGCCGTCGGataacgaaaaaaaaagaaataaagaaaagaaaagatggtTAGTTTCATCAAGGCCATTATTCTGGGCTCATGCAGTGCTACTAAAGCATGTTTTCGCAACATATCTTCGACACTTTTCACCCTCGGTTGTGTTTTTCCAGTAGGCATGCATTAGAGACACAAATCAGTTATCAAATAGAGCGACGTGACAGAATTACGGCATGCTGAGAGGGACATGCAGAACGGCATGCTTGAAGCCAAACTTCTTTTCGCTAGGCATCATGGGAAATCTATCAAAGATACAGTAATAGCACGAAAAGGAAACCAAAAAGATCGTTCTGAAATCCGAAATGAggctcgtgaggctttcccaacCCAGAGCGGGTTTGGGACGTCTGCATGCTCTGAAACAGATGCACTAAAATCCAGATGTTTAACCTAAGATCTAGAGAGCACATGACACATCCAGCACTAAAATATCATGCATGTTCAACCGCGTGGTAGAGATCGTTCCGCAAGCACAGTGAGAGATGCTACCGTTGATAGGAGAATCTGAAAGCGAAGTGCCACCGCCGACAAAACGGATGCggaataaatgtatattaagcCATTTGATCGCACACTGGAAGCCAATTTGGTTGCTTTTTGCAAATAGCATCGTGGCGGCGGCCTCGATTGTGCTGGCTTCTCAGTCGTTTCGCTGTATCTGACGCAATGGGATCGGTTGTCGCGTTATTACTGGAAAGGATATCCCAGAGGGCAAAGGGCAGCAGCAAGTGCATACAGATGTTTTGTCCAAGCACCAAGTGCGTACACACATCGCATACAGGAAAACTGTGCTGATTCAACCCACGCAAAGTTAAACATTTACCCACGTCACAGACTCGACCGACTTTCTGTAAATGATTACAAAACAGGATAGCGTTAGCATTCGCTAGTAAATCACGGCAGTCTCTGATTCACTGCGGTTGTTTAGTACTTCTGCCTCTCTGCGACCGCAGACGAGGGCTTGAAACCCGAAGAGCTGGGAATAGCTTTGCTATCAGGTCTGTAAACCCGTGACGTGTTCTTCATGTAAACAATTTATCCGAAGCGGATCTCAATATGAGCAACCAGCTTTTCCTTCGTCTCgctgggggggaaaaaaaacccccgACACGTCTCAGAAACTGGCCTGACTCAGTCTCGTACAAAATACAGCGCTGTTTTAAACGAAACGTTTGGTCCTCACCGCTCACATGTTCAAAATATTCATCGCCGTGGCATCTCTTGACATTTTCAGATGcaagataacacacacacactcacacacacacacacggtgggTGTCTCCTCGGCTGGTGTGAAGCTGCCTTTTGCAGTAGATCGCATGCTCCCGTTTAGGAGACCCTGATATCCTGTTGGTCGGGGAAGACTCATTAAAACACACGCATACGTGCACACAGAAAGACATACATGCTTATTATGTACTTGCGTGAAGGGGGAGGGCCTTTCTCGGTTTGGCACGTTTGAATGCGCAAAGAGTGTCTCGTCTCTCCTCGCTTTTTTGTCTCGCTTCTTACCTTGTGCTGGGTTTCCCTCCCTGCCTCTGATTTACTAATGCATCGATTGATCACCGTGGAACCCGTCGTCTTGGCGATCACACCTCCATCTCCATGTCGACGGATACAGAGGGCAGGTACAGAATGCTGTTGTTCGGGGTGCTGACGTGTCCTACGGTGTGACTTTTCACCCCGTAGCTGCTAACAGCGGGCGCTGATCCCAGTTTGGTCCGGATGCAGGGGCTCGAGCCGCTCTCGGGGCTCTTGGATCGCGCGTGCTGCGTGCCTTGCGAGCTTCGGCCTTCAAGAAAGTAGGTGAGCATTTGACCTTTGCCCTTCACGCTGACCTGGCCACGGCACTGGAAGTGATAATAACCGGAGAGTAGGCGGAAGACGTCCTCGGTCACCTGGGATGAGGAGGCAGATGAAGTCAGTGCTGTCCATTCTGCTGGCGACGTTGACCGTGTTTCCCCAGATGTCGTACTGAGGCCTGCGAGCCCCGATTACACCTGCAACTACTGGACCCACGTTGATACCTGATCAACAAAAATGATCAAGTAATTCGATTTAGTCCCTTTATCTGATATGTGTACATGTAAagcaaactctgtttaaaaatgaaggttTGTTAAGGTTTTTTAACGtttaattcgattttttttattgtcacatATGCACACCAAAGCTATGTTTTTTTGatcaataaaacagtaaaaacataaatgatattgtaaaaaaaaaattacatgattGTTCTTGGTCTGGaggtattaaaaataatttctaga
>TU202738
CtctcattgttattttattccCGAACAGTGCAAACACAAGTATAAAAGATCTCAATATGAAATTTACATTCACATAGAACcatcacaataaatacattgcaaccccaaaaatagcacaaatattacaaatcatCAATAAAATACTCTTTTAGTTTACtctacaatatatttaatacgtacaataattttgacccgtatcaaatatgaaaatatctaATCGACATGAAAATCTATTCTATGATTTTACTGTGCACACTTTATGcattaataaagttaatatatCATTAATGTTCATAACAGCAGTAAGTTAGGCCACTGTAGTCAAAATAGATCATATTAAGCCATATCAAATAGAACCATTTAGCTGTTTGGCTACATTTGTTGGATCATAGAATCTGAAATATTCAGTGATAACGATAAGCATTTTGGCATTTGGCATTcatattcattaaagaaaaaccaaaaatcTACATATATGAAACTCGAATGAACAGCTCCTTACTTTACGTTAATAAATATGCGTAATTCCTCACATGGCAAAATGAAGCTAAATGCAGCGGGAAACAGAATCGGAGAGAGCATTCCTGAATACGTAGCTTAACGCGAAGTAAACgtcgaaaaaataaaaaaaggaatagcCCATTTGCGAGTCGGTATTGAGCCCCACGTGGTACGATCACTCCGTATGAGAGTAAAAGTTCGCAACGGAACTGAATGCACGCAATAAATCGCAAAGTCGCGCTAGAAAGGAACACAGTTTGATATGTTGGTAACCGTACAGTATGCGTGTTGTTGGCACATATTCAAAAGAAACAGACTTTCTCCAACAGACCCTGGATAAAAAGGCAGTCACTTCAAGAGCTCGACAAGGCGCCAATGCTACAAAACTCCCAGAAAGCTTTCCCCACAGCACCACGCACGGACCAGGTAAGCAAATACGCCGTCGGataacgaaaaaaaaagaaataaagaaaagaaaagatggtTAGTTTCATCAAGGCCATTATTCTGGGCTCATGCAGTGCTACTAAAGCATGTTTTCGCAACATATCTTCGACACTTTTCACCCTCGGTTGTGTTTTTCCAGTAGGCATGCATTAGAGACACAAATCAGTTATCAAATAGAGCGACGTGACAGAATTACGGCATGCTGAGAGGGACATGCAGAACGGCATGCTTGAAGCCAAACTTCTTTTCGCTAGGCATCATGGGAAATCTATCAAAGATACAGTAATAGCACGAAAAGGAAACCAAAAAGATCGTTCTGAAATCCGAAATGAggctcgtgaggctttcccaacCCAGAGCGGGTTTGGGACGTCTGCATGCTCTGAAACAGATGCACTAAAATCCAGATGTTTAACCTAAGATCTAGAGAGCACATGACACATCCAGCACTAAAATATCATGCATGTTCAACCGCGTGGTAGAGATCGTTCCGCAAGCACAGTGAGAGATGCTACCGTTGATAGGAGAATCTGAAAGCGAAGTGCCACCGCCGACAAAACGGATGCggaataaatgtatattaagcCATTTGATCGCACACTGGAAGCCAATTTGGTTGCTTTTTGCAAATAGCATCGTGGCGGCGGCCTCGATTGTGCTGGCTTCTCAGTCGTTTCGCTGTATCTGACGCAATGGGATCGGTTGTCGCGTTATTACTGGAAAGGATATCCCAGAGGGCAAAGGGCAGCAGCAAGTGCATACAGATGTTTTGTCCAAGCACCAAGTGCGTACACACATCGCATACAGGAAAACTGTGCTGATTCAACCCACGCAAAGTTAAACATTTACCCACGTCACAGACTCGACCGACTTTCTGTAAATGATTACAAAACAGGATAGCGTTAGCATTCGCTAGTAAATCACGGCAGTCTCTGATTCACTGCGGTTGTTTAGTACTTCTGCCTCTCTGCGACCGCAGACGAGGGCTTGAAACCCGAAGAGCTGGGAATAGCTTTGCTATCAGGTCTGTAAACCCGTGACGTGTTCTTCATGTAAACAATTTATCCGAAGCGGATCTCAATATGAGCAACCAGCTTTTCCTTCGTCTCgctgggggggaaaaaaaacccccgACACGTCTCAGAAACTGGCCTGACTCAGTCTCGTACAAAATACAGCGCTGTTTTAAACGAAACGTTTGGTCCTCACCGCTCACATGTTCAAAATATTCATCGCCGTGGCATCTCTTGACATTTTCAGATGcaagataacacacacacactcacacacacacacacggtgggTGTCTCCTCGGCTGGTGTGAAGCTGCCTTTTGCAGTAGATCGCATGCTCCCGTTTAGGAGACCCTGATATCCTGTTGGTCGGGGAAGACTCATTAAAACACACGCATACGTGCACACAGAAAGACATACATGCTTATTATGTACTTGCGTGAAGGGGGAGGGCCTTTCTCGGTTTGGCACGTTTGAATGCGCAAAGAGTGTCTCGTCTCTCCTCGCTTTTTTGTCTCGCTTCTTACCTTGTGCTGGGTTTCCCTCCCTGCCTCTGATTTACTAATGCATCGATTGATCACCGTGGAACCCGTCGTCTTGGCGATCACACCTCCATCTCCATGTCGACGGATACAGAGGGCAGGTACAGAATGCTGTTGTTCGGGGTGCTGACGTGTCCTACGGTGTGACTTTTCACCCCGTAGCTGCTAACAGCGGGCGCTGATCCCAGTTTGGTCCGGATGCAGGGGCTCGAGCCGCTCTCGGGGCTCTTGGATCGCGCGTGCTGCGTGCCTTGCGAGCTTCGGCCTTCAAGAAAGTAGGTGAGCATTTGACCTTTGCCCTTCACGCTGACCTGGCCACGGCACTGGAAGTGATAATAACCGGAGAGTAGGCGGAAGACGTCCTCGGTCACCTGGGATGAGGAGGCAGATGAAGTCAGTGCTGTCCATTCTGCTGGCGACGTTGACCGTGTTTCCCCAGATGTCGTACTGAGGCCTGCGAGCCCCGATTACACCTGCAACTACTGGACCCACGTTGATACCTGATCAACAAAAATGATCAAaagaaaaaaaaatgcataaagattcagaacaacatgaggAAAAACAGGACATCTGACTACAACCCAATGactgcagaaaattcagctttgcatcacaggaattaattacatgctaaagtatattaaaaaagaaaacctattttaagttataatatttaattactgatttaagtaatattatattactgaTATTTTGAATGCTCTAAAAAACAAGTCTTTTTGCTTCTcaaataataaatcttttttaaagtcGTTTAGATCATTTTACTGGAAAATGTgatttgtaaaatgatttttgctgtgtttgcacacacacacacacacacactctctctgtgtaCCTTGGATCCCGCAGTGGGGACGAGTCCGACCGCAGCCATGTAAGTACTGCCAATAGTTTTGATCTTCTCAATGTCTCTGTAGCATTCCTTATCCATCAGCTACAgacagaggaagaaagagagagatgatgtGATGgagaaataaatgaagcctAGAGTGGGATTAAGGTAACTGGCGCACTGAGCCAAAACATACATATCTCAGGATGAGAGACAAGAAATTCTCACCGCATCAAAGTCGGCGATGATCTCGTTTAGCAGCCGGAGACATTCCACACCCATGTTGTTTCCATCCAGCTCAATGTAGAAGTCATTAAAGTTGGGGATGGAGGCGAACAGGACGCCCACCTGAGAGTAAGACTGATAATACAAGTCCTGGAACAGTGAAAGAGCAGGAAAGGAAAGAGCCGTGAGACCCTCAGGGGATGATACCACTGATCCAGGCTTAGAGAAGTCAGGTCTACGGTAATCAGTCACGACACGCAAAAATTGGACAAGTTGATTTCGGTCAAAACAAAACTTGCTTTCgatattgaaaatgcatttgagtGCATTTGAATGACCTGTCCATCTCAAATTAAAGATTCGATCGCGTCACAGTGGTTCACGCGCATTAAACAAGCGGGTTTTCTCGCTCTTCTGAAATAGAAGGTTTTGATTTAGTATGTAGACATATCGGCCACGTACACGCTGCAAAGTTTTGGGAGTGACAACCGCATTTAAATACAGAAGTAACTCCCTTTAATTATCATTCAGTATCTGTATGGAGTATAGGAGTCACTCCcaaaattatgattttagaCATAACCATAGCAACAATATGGCGTCTCATGGCTGTAAACAAGAAACATGGCACCAAAAGATTAATATAATATTGCTTACCAGActaatattgtttaaatgaatgtttgagTTTAGACAGACTAACTcgttaataaaaaagcattttaatcttCCTTTTAAGTGTCAGGCTAAAATCATTTATAGAGGTTGGCCATTTTACACTAGCATTCAAGGTagggtttttgaaagaagccaaatttaaattttgtcaaaatgtaatCACCAATATAGTAAtaacagcaatattgtaaaatattattacaacttaaaataaaatgtacaccttattttaaaaatgcaaattcaatcaaatgtaaacctttttttttttatatatataaattgaaaaaaatacatgtttttgtggtgggaaaatttcatttttatcagtCATTTTCATAGGGTTATTAGAgggtttaatgcattataattattcataatgtgcgttgtaatgcattatatcttGTCGTAAATAATTCTTacttttagaaattaaaatgcatagtgCAACAATTAATTGATGTtaatgttataatgtattaactgtggttacaattattcataaaattgtacaatgcattataaggtaatgcattaaaactactttatAAAGGCTAAGTTAAGTGTTATAGTGTCTTTTTTCCATGGAAACTgtaatgaattttaatgaaaagaaagttcaaaggaacagcatttattaaaaaattttttttgtaaaattaagaatgtctttactgtaatttttgaccaattaaaaaaaaaaaaaaattaaatttaacttaaaatgtttgcatCTTGTATGTACTTTTGCATATGTGTCCAAGATTTTCACTTCCTTATGCCACTGTTTACAATATAATTCCACGCTCAGGAGAGGATGCTTGCTTCAGAGCTGCTGCAACAGATTTCAGGATGTCTGATTGCATCAATTCCTGTGAAGGATCTTGGACAGGAAAAGAGGCGAGCAGCATGTGTTGAGCATGCAGCaaacataacaacaacaaaaaaaagtaacaaaacgTGTAACGGGAGTGTAATCACACATTCATTGTGTTCGTGAGGCTTCACAATGAAGCCTGGCAGCGAGATCACAAAGCCAGATGCTCTGAGCATTTACACTACACACAATCACAATCTTATCTCATTTGCA

Function

symbol description
adcy1a Predicted to enable adenylate cyclase activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and cAMP biosynthetic process. Predicted to act upstream of or within cyclic nucleotide biosynthetic process and intracellular signal transduction. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 44. Orthologous to human ADCY1 (adenylate cyclase 1).

NR:

description
PREDICTED: adenylate cyclase type 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202737 False 3255 lncRNA 0.44 2 9444582 9447911
TU202738 True 5358 lncRNA 0.40 4 9440237 9447911

Neighbor

gene id symbol gene type direction distance location
ftr85 LOC107697417,LOC107716559,LOC107566153,LOC107712832,LOC107581513,LOC107580448 coding downstream 58244 9377049 ~ 9381993 (-)
si:dkeyp-51f12.2 si:dkeyp-51f12.2 coding downstream 80696 9357408 ~ 9359541 (-)
si:dkeyp-51f12.3 NA coding downstream 84953 9339363 ~ 9355284 (-)
bsnd LOC107697389,LOC107716551,LOC107566144,LOC107687198,LOC107712846,LOC107581515 coding downstream 101017 9335931 ~ 9339220 (-)
prkaa2 prkaa2,LOC107716554 coding downstream 344873 9078745 ~ 9095364 (-)
igfbp3 LOC107687177,LOC107712886,LOC107581452,LOC107697441,LOC107755684,LOC107559743 coding upstream 15823 9463734 ~ 9477418 (-)
si:ch211-191a24.3 LOC107712889,LOC107687175,LOC107581451,LOC107559742 coding upstream 61755 9509666 ~ 9545061 (-)
si:ch211-191a24.4 LOC107687195,LOC107712891,LOC107581511,LOC107697473,LOC107559734,LOC107712379 coding upstream 97930 9545841 ~ 9550202 (-)
mep1ba mep1b,LOC107581508,LOC107687173,LOC107581493 coding upstream 107547 9555458 ~ 9575674 (-)
LOC122325177 LOC107712849,LOC107687193 coding upstream 131996 9579907 ~ 9583650 (-)
G137255 NA non-coding downstream 35696 9404130 ~ 9404541 (-)
G137253 NA non-coding downstream 39028 9400382 ~ 9401209 (-)
G137250 NA non-coding downstream 47008 9392950 ~ 9393229 (-)
G137132 NA non-coding downstream 187267 9252712 ~ 9252970 (-)
LOC122324791 NA non-coding downstream 199540 9222279 ~ 9240697 (-)
G137267 LOC107712887,LOC107559744,LOC107755683,LOC107687178,LOC107581453 non-coding upstream 11594 9459505 ~ 9536077 (-)
G137346 NA non-coding upstream 760163 10208074 ~ 10208585 (-)
G137348 NA non-coding upstream 784113 10232024 ~ 10235306 (-)
G137356 NA non-coding upstream 830028 10277939 ~ 10278186 (-)
G137441 NA non-coding upstream 1010342 10458253 ~ 10458790 (-)
pcsk9 pcsk9,LOC107687184,LOC107566146,LOC107697372,LOC107716550,LOC107578795 other downstream 105176 9325653 ~ 9335061 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other downstream 156854 9255548 ~ 9283383 (-)
G137056 NA other downstream 618518 8821154 ~ 8821719 (-)
G137054 LOC107660256,LOC107566921 other downstream 620910 8818854 ~ 8819327 (-)
LOC122324857 mysm1,LOC107687344,LOC107581496,LOC107597795,LOC107697304 other downstream 839282 8591692 ~ 8600955 (-)
si:ch73-74h11.1 LOC107687168,LOC107588915 other upstream 243213 9691124 ~ 9700538 (-)
si:dkey-5n18.1 LOC107723560,LOC107687192,LOC107588914 other upstream 249751 9697662 ~ 9751383 (-)
G137330 NA other upstream 490054 9937965 ~ 9938877 (-)
G137451 NA other upstream 1119386 10567297 ~ 10570737 (-)
G137469 tdh,LOC107561940,LOC107723287,LOC107684809,LOC107589050,LOC107701506,LOC107746115 other upstream 1274010 10721921 ~ 10724069 (-)

Expression


Co-expression Network