G137441


Basic Information

Item Value
gene id G137441
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 10458253 ~ 10458790 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU202991
CAAGCACTTGTTAGATTCCAGTGTATCCTGTCATAGCTATGCAAAACTTTGATAATCAAAAGCAGGATCATAGCTAAATAACTTTACTTGTAGATCATTCTgatttaatataacaaaaacgTGCTAAAGTCTGATATTGTGGAGGCTgtgctttaaaattataatcttcATTCAACTGATGAACATTTCTGAAAGGCTGACGCTAATTAGTTTTGATTAATACTTTAGTCATGTTAAccctgctttaaatgttttaaatgattaggAGTTGAAACTTTTAGAAATTCAGAGAAGTAATCAAAGgttatattactttaataaaagaaCTGAAGTAGTTTCGTTacactttgcattttaaatagggTAATCTCTAACTTAAGTAACCTTTCCAACAttctgtgtgtgcgcgtgcatatATAGCCTCCAACCTTcttgaaataaattcatacttttGAATAGTCTGCTGAATGTTGTGTATAAAACATCTACCTGTTCTTTTAGAGATGCTGAATCTCCTCTCCCTTGTCTTTCCAAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202991 True 538 lncRNA 0.32 1 10458253 10458790

Neighbor

gene id symbol gene type direction distance location
LOC122325472 dhcr24,LOC107687183,LOC107581458,LOC107566150 coding downstream 472349 9983522 ~ 9985904 (-)
dsg2.1 dsg2.1,LOC107687165,LOC107745992,LOC107588893,LOC107559724,LOC107712898 coding downstream 732837 9713267 ~ 9725416 (-)
zmp:0000001074 LOC107559725,LOC107656729 coding downstream 746779 9701899 ~ 9711474 (-)
ttr ttr,LOC107712897,LOC107588917,LOC107687167,LOC107712388,LOC107656732,LOC107559732 coding downstream 774341 9680846 ~ 9683912 (-)
LOC122325172 NA coding downstream 792454 9659140 ~ 9665799 (-)
psma8 psma8,LOC103029839,LOC100304914,LOC107572146,LOC107723426 coding upstream 401 10459191 ~ 10462437 (-)
gpr132b LOC107561042,LOC107723405,LOC107701477,LOC107684800,LOC107746348,LOC107572145 coding upstream 18899 10477689 ~ 10484360 (-)
vipas39 vipas39,LOC107723381,LOC107746035,LOC107701516,LOC107572140 coding upstream 25716 10484506 ~ 10493235 (-)
cdc42bpb cdc42bpb,LOC107684799,LOC107746049,LOC107723369,LOC107701514 coding upstream 35296 10494086 ~ 10550573 (-)
enpp5 LOC107701510,LOC107684795,LOC107589043,LOC107746078,LOC107723350,LOC107561943 coding upstream 162390 10621180 ~ 10627044 (-)
G137356 NA non-coding downstream 180067 10277939 ~ 10278186 (-)
G137348 NA non-coding downstream 222947 10232024 ~ 10235306 (-)
G137346 NA non-coding downstream 249668 10208074 ~ 10208585 (-)
G137267 LOC107712887,LOC107559744,LOC107755683,LOC107687178,LOC107581453 non-coding downstream 922176 9459505 ~ 9536077 (-)
G137264 adcy1a,LOC107559745,LOC107708029,LOC107697434,LOC107687179,LOC107581454,LOC107712833 non-coding downstream 1010342 9440237 ~ 9447911 (-)
G137448 NA non-coding upstream 97955 10556745 ~ 10562461 (-)
G137461 NA non-coding upstream 151053 10609843 ~ 10611455 (-)
G137462 NA non-coding upstream 160145 10618935 ~ 10620941 (-)
G137465 fam167ab,LOC107723535,LOC107684816,LOC107589044,LOC107746085,LOC107561944 non-coding upstream 171931 10630721 ~ 10631264 (-)
G137466 fam167ab,LOC107746085,LOC107684816,LOC107589044,LOC107561944,LOC107701512,LOC107723535 non-coding upstream 175060 10633850 ~ 10634771 (-)
G137330 NA other downstream 519376 9937965 ~ 9938877 (-)
si:dkey-5n18.1 LOC107723560,LOC107687192,LOC107588914 other downstream 706870 9697662 ~ 9751383 (-)
si:ch73-74h11.1 LOC107687168,LOC107588915 other downstream 757715 9691124 ~ 9700538 (-)
pcsk9 pcsk9,LOC107687184,LOC107566146,LOC107697372,LOC107716550,LOC107578795 other downstream 1123192 9325653 ~ 9335061 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other downstream 1174870 9255548 ~ 9283383 (-)
G137451 NA other upstream 108507 10567297 ~ 10570737 (-)
G137469 tdh,LOC107561940,LOC107723287,LOC107684809,LOC107589050,LOC107701506,LOC107746115 other upstream 263131 10721921 ~ 10724069 (-)
LOC122324412 nme6,LOC107589089,LOC107697297,LOC107723520 other upstream 672634 11131424 ~ 11136612 (-)
LOC122325476 cdh2,-,cdh4,LOC107561048,LOC107746014,LOC107571545,LOC107701519,LOC107684812,LOC108416271,LOC107656023,LOC107590155,LOC107728629,LOC107739294,LOC107553647 other upstream 683155 11141945 ~ 11182183 (-)
gsx2 gsx2,LOC107601899,LOC107597471,LOC107683998,LOC107755223,LOC107718430 other upstream 908133 11366923 ~ 11368490 (-)

Expression


Co-expression Network