G137588


Basic Information

Item Value
gene id G137588
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 10806521 ~ 10806780 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU203205
CGGAACAATTCTTTGGGTAATAAGAAATGGCacttaagcaccaaatcagcatattaaaataagttcCGGAGAATCGTGTGACTTcgaaaaaagaggaaatgtaCTCAGAACATTGGCAGTGTTGGTCGTGACAAGGTTCTCAAATGcaaccctggaccacaaaaccagtcaagtCGCTGGGCTATATTTGTAACAACAGCCAAAAATACTTTGTAtggctaaaaaaatgttttctattatgccaaaaatcattaggttAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU203205 True 260 lncRNA 0.37 1 10806521 10806780

Neighbor

gene id symbol gene type direction distance location
xkr6b xkr6b,LOC107723320,LOC107684793,LOC107589046,LOC107746102,LOC107701509,LOC108258067,LOC105897758,LOC108435015,LOC103023855 coding downstream 107089 10649046 ~ 10699432 (-)
ccm2 ccm2,LOC107589047,LOC107684794,LOC107723330 coding downstream 157873 10638226 ~ 10648648 (-)
enpp5 LOC107701510,LOC107684795,LOC107589043,LOC107746078,LOC107723350,LOC107561943 coding downstream 179477 10621180 ~ 10627044 (-)
cdc42bpb cdc42bpb,LOC107684799,LOC107746049,LOC107723369,LOC107701514 coding downstream 255948 10494086 ~ 10550573 (-)
vipas39 vipas39,LOC107723381,LOC107746035,LOC107701516,LOC107572140 coding downstream 313286 10484506 ~ 10493235 (-)
si:dkey-71h2.2 si:dkey-71h2.2,LOC107589054,LOC107697321,LOC107723250,LOC107701504,LOC107746162 coding upstream 32366 10839146 ~ 10870735 (-)
si:ch211-278j3.3 LOC107589055,LOC107723221,LOC107746185,LOC107561935,LOC107701501 coding upstream 65059 10871839 ~ 10888227 (-)
snx17 snx17,LOC107723180,LOC107701503,LOC107746210 coding upstream 89208 10895988 ~ 10922882 (-)
eif2b4 eif2b4,LOC107723173,LOC107589057,LOC107697314,LOC107701499,LOC107561932 coding upstream 118683 10925463 ~ 10932315 (-)
trnal-cag_34 NA coding upstream 125782 10932562 ~ 10932644 (-)
G137578 LOC107684790,LOC107723476,LOC107589053 non-coding downstream 20186 10785953 ~ 10786335 (-)
G137573 rp1l1b,LOC107589053,LOC107723476,LOC107684790,LOC107561938,LOC107746156 non-coding downstream 27115 10779130 ~ 10779406 (-)
G137560 NA non-coding downstream 52330 10753957 ~ 10754191 (-)
G137559 NA non-coding downstream 53263 10752847 ~ 10753258 (-)
G137468 NA non-coding downstream 85610 10718794 ~ 10720911 (-)
LOC122325152 NA non-coding upstream 128166 10934946 ~ 10937374 (-)
LOC122325111 NA non-coding upstream 307016 11113796 ~ 11114925 (-)
G137621 LOC107739294,LOC107553647 non-coding upstream 384879 11191659 ~ 11194847 (-)
G137644 NA non-coding upstream 408446 11215226 ~ 11227365 (-)
G137751 NA non-coding upstream 805243 11612023 ~ 11613622 (-)
G137469 tdh,LOC107561940,LOC107723287,LOC107684809,LOC107589050,LOC107701506,LOC107746115 other downstream 82452 10721921 ~ 10724069 (-)
G137451 NA other downstream 235784 10567297 ~ 10570737 (-)
G137330 NA other downstream 867644 9937965 ~ 9938877 (-)
si:dkey-5n18.1 LOC107723560,LOC107687192,LOC107588914 other downstream 1055138 9697662 ~ 9751383 (-)
si:ch73-74h11.1 LOC107687168,LOC107588915 other downstream 1105983 9691124 ~ 9700538 (-)
LOC122324412 nme6,LOC107589089,LOC107697297,LOC107723520 other upstream 324644 11131424 ~ 11136612 (-)
LOC122325476 cdh2,-,cdh4,LOC107561048,LOC107746014,LOC107571545,LOC107701519,LOC107684812,LOC108416271,LOC107656023,LOC107590155,LOC107728629,LOC107739294,LOC107553647 other upstream 335165 11141945 ~ 11182183 (-)
gsx2 gsx2,LOC107601899,LOC107597471,LOC107683998,LOC107755223,LOC107718430 other upstream 560143 11366923 ~ 11368490 (-)
G137773 LOC107755215,LOC107683983,LOC107601925,LOC107718419,LOC107665290,LOC107597464 other upstream 875625 11682405 ~ 11683318 (-)
G137967 mdn1,LOC107601919,LOC107755265,LOC107683937,LOC107597457,LOC107665348,LOC107737285 other upstream 1411983 12218763 ~ 12219639 (-)

Expression


Co-expression Network