LOC122324483


Basic Information

Item Value
gene id LOC122324483
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 13260919 ~ 13264284 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU204008
ATTCCAAGAACCACAACATCTGCTATATCAGATTTTCTTGGTCAAGTTGTTTTTCTGGTTCAGCACTGTATTGCTGCTTTAGCTGCTAATGAGCATAACACCTCCACTGAAACTTTTTAACCACTTTTCTTTAAGGGCCTTTGAACTTCAGTTTTTGCTGATGACGAGGAAATCCCTTCCTACTCATATGATTGTGGGGTTAAATCATTTTGATCGATGGATTCTCTACGATAATTCAAAGTTACGATATGATAATTTCAACCCCAAGAATGCTGATTTTGAAGATTTCACCATCCTGCTTATTGGCTATGTTAATATACCACAAGATAACCATAGGAGAGAGGGCCGTTAAAATTTCCTGAAGAGGGACACCGTTGGACCATtccttttaatttgtttcaaggcttaaacgaacaaaaaaagGAACACTTTGATTGAGCACGTTTCAcgatttaaagaaatatttgacaCAAAAAGCCTTCCTTTAcgcaaattaaaaagcaaaataaagatgGATTGATTACGACTTGGC
>XM_043218917.1
tatgtaaatacatgtttttacatgtttgaGTCATACCTTACAcgtgataaaataaaaaggttgtaCTTCCGGAGCAACTCACTTGGGCACGTAGCGCAAAACACTACGACATGGAATCGAAGACGTTAAGATTCGATTTGTATTCCTGGAAACAAAAAAGATACAATGAACTCTTAGAAAAAGCCGATGAATTGGTGAAGATTGTGTCAAGgTTTGATTCTAGGATCAATATTTACTCCATCTATTTAAAAGATGATGGTGAATTTGGCCCAGTTAAATTCGTGAACACATGCGTTCCTGATTCATTTATGATGGccttatttatttgctatattCAGTATGACCATATAGCATCTCTTTTTAACTCTTTTGTAAAACTGAGGGCACCTATGGTCTTCTTAAGAGCTAGAATGTATAATGAAGCTAAAGCATCTTGGTTATTTTGCTGTAATGTTACTGTGACGGAAAATACTGAAAACTACGTAATGGATGCTTGGAGTAACCCAAAGGACCATTTACACATGTTTGATGAATTTATACTCGGCAACGACAAACTAAGCACATTTAAATCTCTTGGCAATGTGCATGCCCTGGGTTTCCGTGATCATAATCCTTTGCTGGTCCTAGTGGAAATAAATCAGGCAATGGATACAAGGCCACCTCTATGCATTGATGACGATTATGGCAGGGCCTTTGAACTTCAGTTTTTGCTGATGACGAGGAAATCCCTTCCTACTCATATGATTGTGGGGTTAAATCATTTTGATCGATGGATTCTCTACGATAATTCAAAGTTACGATATGATAATTTCAACCCCAAGAATGCTGATTTTGAAGATTTCACCATCCTGCTTATTGGCTATGTTAATATACCACAAGATAACCATAGGAGAGAGGGCCGTTAAAATTTCCTGAAGAGGGACACCGTTGGACCATtccttttaatttgtttcaaggcttaaacgaacaaaaaaagGAACACTTTGATTGAGCACGTTTCAcgatttaaagaaatatttgacaCAAAAAGCCTTCCTTTAcgcaaattaaaaagcaaaataaagatgGATTGATTACGACTTG
>XM_043218918.1
tatgtaaatacatgtttttacatgtttgaGTCATACCTTACAcgtgataaaataaaaaggttgtaCTTCCGGAGCAACTCACTTGGGCACGTAGCGCAAAACACTACGACATGGAATCGAAGACGTTAAGATTCGATTTGTATTCCTGGAAACAAAAAAGATACAATGAACTCTTAGAAAAAGCCGATGAATTGGTGAAGATTGTGTCAAGgTTTGATTCTAGGATCAATATTTACTCCATCTATTTAAAAGATGATGGTGAATTTGGCCCAGTTAAATTCGTGAACACATGCGTTCCTGATTCATTTATGATGGccttatttatttgctatattCAGTATGACCATATAGCATCTCTTTTTAACTCTTTTGTAAAACTGAGGGCACCTATGGTCTTCTTAAGAGCTAGAATGTATAATGAAGCTAAAGCATCTTGGTTATTTTGCTGTAATGTTACTGTGACGGAAAATACTGAAAACTACGTAATGGATGCTTGGAGTAACCCAAAGGACCATTTACACATGTTTGATGAATTTATACTCGGCAACGACAAACTAAGGGCCTTTGAACTTCAGTTTTTGCTGATGACGAGGAAATCCCTTCCTACTCATATGATTGTGGGGTTAAATCATTTTGATCGATGGATTCTCTACGATAATTCAAAGTTACGATATGATAATTTCAACCCCAAGAATGCTGATTTTGAAGATTTCACCATCCTGCTTATTGGCTATGTTAATATACCACAAGATAACCATAGGAGAGAGGGCCGTTAAAATTTCCTGAAGAGGGACACCGTTGGACCATtccttttaatttgtttcaaggcttaaacgaacaaaaaaagGAACACTTTGATTGAGCACGTTTCAcgatttaaagaaatatttgacaCAAAAAGCCTTCCTTTAcgcaaattaaaaagcaaaataaagatgGATTGATTACGACTTG

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0005876 spindle microtubule cellular_component

KEGG:

id description
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU204008 False 532 lncRNA 0.36 2 13260919 13261962
XM_043218917.1 True 1083 mRNA 0.37 7 13260921 13264284
XM_043218918.1 False 954 mRNA 0.36 6 13260921 13264284

Neighbor

gene id symbol gene type direction distance location
epha7 epha7,LOC107665377,LOC107683932,LOC107737386 coding downstream 171274 13014943 ~ 13089645 (-)
map3k7 map3k7,LOC107665363,LOC107597461,LOC107683934,LOC107601937 coding downstream 855270 12390601 ~ 12405649 (-)
bach2b bach2,bach2b,LOC107755268,LOC107683933,LOC107737315,LOC107665358 coding downstream 880365 12295132 ~ 12380554 (-)
katna1 katna1,LOC107755263,LOC107683938,LOC107737259,LOC107597454,LOC107665349 coding downstream 1057999 12197454 ~ 12202920 (-)
LOC122324548 NA coding downstream 1075494 12181779 ~ 12185425 (-)
itsn2a itsn2a,LOC107737380,LOC107665294,LOC107737296,LOC107556117 coding upstream 5036 13269320 ~ 13306686 (-)
mrpl19 mrpl19,LOC107683989,LOC107737376,LOC107665319,LOC107737334 coding upstream 43582 13307866 ~ 13310366 (-)
si:dkey-183n20.15 si:dkey-183n20.15,LOC107683926,LOC107737378,LOC107556150,LOC107737298,LOC107665320,LOC107593868 coding upstream 58375 13322659 ~ 13326578 (-)
LOC122324693 cyp2n13,LOC107737374,LOC107593808 coding upstream 75199 13339483 ~ 13343214 (-)
LOC122324694 cyp2ad6,LOC107665314,LOC107556136 coding upstream 78866 13343150 ~ 13347685 (-)
LOC122325041 NA non-coding downstream 439 13214071 ~ 13260480 (-)
G138042 NA non-coding downstream 141146 13119539 ~ 13119773 (-)
G138016 NA non-coding downstream 379610 12873706 ~ 12881309 (-)
G137932 NA non-coding downstream 1063494 12195529 ~ 12197425 (-)
G137944 NA non-coding downstream 1066560 12053777 ~ 12194359 (-)
G138186 NA non-coding upstream 103585 13367869 ~ 13368510 (-)
G138158 NA non-coding upstream 115138 13379422 ~ 13383963 (-)
G138162 NA non-coding upstream 121686 13385970 ~ 13391343 (-)
G138159 LOC107556152 non-coding upstream 124637 13388921 ~ 13393595 (-)
G138217 zgc:153896,LOC107721358,LOC107665343,LOC107737337,LOC107556161 non-coding upstream 214488 13478772 ~ 13479024 (-)
mdn1 mdn1,LOC107755265,LOC107737285,LOC107597457,LOC107683937,LOC107665348,LOC107601919 other downstream 980607 12241801 ~ 12280312 (-)
G137949 mdn1,LOC107755265,LOC107601919,LOC107683937,LOC107597457,LOC107665348,LOC107737285 other downstream 1036649 12222810 ~ 12224270 (-)
G137967 mdn1,LOC107601919,LOC107755265,LOC107683937,LOC107597457,LOC107665348,LOC107737285 other downstream 1041280 12218763 ~ 12219639 (-)
G137773 LOC107755215,LOC107683983,LOC107601925,LOC107718419,LOC107665290,LOC107597464 other downstream 1577601 11682405 ~ 11683318 (-)
gsx2 gsx2,LOC107601899,LOC107597471,LOC107683998,LOC107755223,LOC107718430 other downstream 1892429 11366923 ~ 11368490 (-)
cracd kiaa1211,LOC107555764,LOC107737310,LOC107665299,LOC107556121 other upstream 159674 13423958 ~ 13447388 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other upstream 282992 13547276 ~ 13548591 (-)
G138285 LOC107555741,LOC107659217,LOC107665323 other upstream 400222 13664506 ~ 13692007 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other upstream 499051 13763335 ~ 13767824 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other upstream 929449 14193733 ~ 14198528 (-)

Expression


Co-expression Network