G138399 (LOC107711644,LOC107659205,LOC107721344,LOC107602456,LOC107665390,LOC107602691,LOC107555778)


Basic Information

Item Value
gene id G138399
gene name LOC107711644,LOC107659205,LOC107721344,LOC107602456,LOC107665390,LOC107602691,LOC107555778
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 13941228 ~ 13999349 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU204354
tccattttcatttgttttatttgacatacTGACCTGCTACAATGTATTGCATAGAATATGACtgcaaaagaaaatgctttatttacagACCTCACAAAAATCTGCGGTCAAAACAGATCAAAAGGACAGTTTCTGGGGAGAAGAAAACGTAGGGTGTAAAAGTCACCattaagggggaaaaaaaaacaacaacaacaaaaaaaacatctagccattgattcattcaaaaggTATATAGGCCTACTACATTGTGTCCTTTGCAATTAGGCAAGACAGCGcttatgttcatattttcatattgcaCTTGGGACAAAGTGACATTTTGAGGTTTCTGATATTACAATTTCATTAGgatacttgaaataaaaaaggttctcttaaaaaataaataaatgccaaaTTAACAAGATGATGTTATGTTTAAAGCTCGCCGTTTTGTGCCTCACAACCAAGCAaatttgatgatgatgatacaaACGCTTGCTGCTTTTTGTATTCTCTGTGCAACCGGTACATCAAACGTACCGTACATTATTTGAGTAAGCTAGTTTACAAGTTTACAACACAGTGTAAACCTCTTTTCACTGCTGCTCTACGCAATACATGCTCCCAGACTAAAGCATAATGAACATTAGTTTAAAagcagaggctcctggggctgATTATTGTGAAACAAAATGTCCTTCAAGAGACTAAAACTCAAGCAGCAGgagacattacatttaaaacgaGGCCGACAAATGAAAGCTCTCCTCCTTAACCACTTTAgcataaaaactgttaaaaagctGCCTGAATAACTGCCTGGTCCAAAGGGAAGTGAACACCATAAAGAAGATCCCATCGTGGTCAGCACAGATCAAAACCTTTACAAATAATTTCAATGATACACATCTCTCATAATTCTGCACTGTATATGTACACATTAATTATTACTAAGAAGAGGAGGTGAAGTACaaatcacactttaaaaaaaacaaaacctccGAAAGACAGAAGTCTACTGATCATATCTCACtcttaaataaaagcaatatattaTCTCATGATCTTcagtcaacaaaaaaaaatcaaaacaagtaaaatatatatatatatatataaatacaaatatatacacacacacacacacacacacacacaacacaaataaacaaaaaaaagaaacaaactgatCAAGCTTACAAAGCTTTAAAAGCTACACACTCATTAGATCCACAGCTTTCAGCATTAAAAACAGGCGCTGTTAGAACTCCGATGGCCTCACCATACAATCTCTCTCTGACTTATGGTTACTGTCTTACACAAGCGTGTTTCCTAAAATCTGAGTGTAAACTTCGCAAGAGTCAGGTTTTCTCTGTGGTGGTGCATGTGTCTTGTGAGCGGGAAAGGCAGGGTGGGGCCTCTGCGAGCCTGAGTTTAAAGGGGTACAAGCGTCTTACTTTcgaccaaaacacacacacacacacacacacacacacacacaaaataaaaaaaaatacacatacgaAATGTGAATTGCTGACATCTAAATACTagtatttcttgtttattttagtactaGACAGACAAACATCACATATTTAAGATGGGCCTCTGAATCTGCCAAAGAAGAGGATGCTGTTGGTGGGATTGTGCCTGATGAAGAACAAGAAGGGGTGATCTGCCATGAAGTGCTCCTCTCGAAACATACAGAATGCCACAATGGCTGCCGTAGCGGCTGCTGCCTCTGTGCCTTCTTCATTTACATCCACGAAAGCCTTGTGGGCAACTGCTGAAAGGAAGAGCCCACCCTGACTGCTCATGCCTGTCAGATCAGCCTTTGGACCCTGAAACACAGAGGTCATCCCCATGCCCATCAATATTTCTGCTAATGAGCTCTCAACCTCCAGCTTAAACTTTGGCAGGTGGACTATGATCTCTGTATTGGTGTCCATATTGTTTCTGTTGGTCCATTCATTCAGCTTATCAAGGGTCAGCTCGCTCTCCAG

Function

NR:

description
PREDICTED: leukocyte elastase inhibitor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204354 True 1991 lncRNA 0.39 2 13941228 13999349

Neighbor

gene id symbol gene type direction distance location
mylk4b mylk4b,LOC107721383,LOC107659202,LOC107555775,LOC107665331,LOC107711643,LOC107602975 coding downstream 2810 13911717 ~ 13938418 (-)
gmds gmds,LOC107721371,LOC107711642 coding downstream 30731 13852032 ~ 13910497 (-)
exoc2 exoc2,LOC107721345,LOC107659211,LOC107711641,LOC107665386,LOC107555744 coding downstream 136857 13781126 ~ 13804371 (-)
si:dkey-25e12.3 LOC107665334,LOC107659167,LOC107721285,LOC107556143,LOC107555748 coding downstream 170379 13768600 ~ 13770849 (-)
mthfd1l mthfd1l,si:ch211-266i18.6,LOC107659212,LOC107721348,LOC107665399,LOC107711640,LOC107556131 coding downstream 179278 13735269 ~ 13761950 (-)
itpk1a itpk1a,LOC107586239,LOC107659161,LOC107602955,LOC107711651,LOC107665329 coding upstream 35390 14034739 ~ 14050388 (-)
si:dkeyp-55f12.3 NA coding upstream 55073 14054422 ~ 14055315 (-)
btbd7 btbd7,LOC107659192,LOC107721332,LOC107583814,LOC107711654,LOC107602295,LOC107665372 coding upstream 62693 14062042 ~ 14106765 (-)
asb2a.1 LOC107721379,LOC107659189,LOC107583790,LOC107711656,LOC107602264 coding upstream 154394 14153743 ~ 14161562 (-)
asb2a.2 asb2a.2,LOC107659190,LOC107721380,LOC107583801,LOC107602948,LOC107711632,LOC107665367 coding upstream 163938 14163287 ~ 14168599 (-)
G138351 NA non-coding downstream 91054 13849940 ~ 13850174 (-)
G138335 foxq1b,LOC107659165,LOC107721275,LOC107711626,LOC107665328,LOC107555749,LOC107556144 non-coding downstream 109168 13830577 ~ 13832060 (-)
G138232 NA non-coding downstream 426095 13514765 ~ 13515133 (-)
G138221 slc35f6,LOC107721386,LOC107555739,LOC107683918,LOC107737338,LOC107665330 non-coding downstream 443202 13495682 ~ 13498026 (-)
G138217 zgc:153896,LOC107721358,LOC107665343,LOC107737337,LOC107556161 non-coding downstream 462204 13478772 ~ 13479024 (-)
G138415 LOC107659195,LOC107583832,LOC107659196 non-coding upstream 31816 14031165 ~ 14033456 (-)
G138463 NA non-coding upstream 182860 14182209 ~ 14183160 (-)
G138502 NA non-coding upstream 270374 14269723 ~ 14467414 (-)
G138537 NA non-coding upstream 427610 14426959 ~ 14428252 (-)
G138562 NA non-coding upstream 525383 14524732 ~ 14525023 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other downstream 173404 13763335 ~ 13767824 (-)
G138285 LOC107555741,LOC107659217,LOC107665323 other downstream 249221 13664506 ~ 13692007 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other downstream 392637 13547276 ~ 13548591 (-)
cracd kiaa1211,LOC107555764,LOC107737310,LOC107665299,LOC107556121 other downstream 493840 13423958 ~ 13447388 (-)
LOC122324483 NA other downstream 676944 13260919 ~ 13264284 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other upstream 194384 14193733 ~ 14198528 (-)
LOC122324589 armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129 other upstream 442184 14441533 ~ 14445925 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other upstream 993750 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other upstream 997776 14997125 ~ 15003202 (-)
LOC122325611 NA other upstream 1843049 15842398 ~ 15842618 (-)

Expression


Co-expression Network