G138415 (LOC107659195,LOC107583832,LOC107659196)


Basic Information

Item Value
gene id G138415
gene name LOC107659195,LOC107583832,LOC107659196
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 14031165 ~ 14033456 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU204376
TGCGTTTTAACCGTGTAGGTGTCCTACCCCTGTCTTTCTGCTGCCGCTGCCCTCCTCGTCTCGTTTGTCCTGTGGTTGAGTTTGTGCCATGAGCTGCAGCTCCTGCTCCTCCGGGCTCCTCCACAGCTCTCCCTCCTGATCTTCTCGCTCCTTAGAGTGGTGTGGTTCTTCCCAGTGCTCATCCAGTTTTGGGCTTGCCTCTTCTCTCTTGTGGGACAGTTTGCTCACACGACTCCAGCGCTTCACTCCGACCTCTCTTTTCTTCCCCTCCTCTTCTTCCAGCTCTTCTTTTGAATGTGTTCTCTCTGTTTCAGCTCCCTTGTGCTGCTCGCTGTCCTCCGTGATGGGTTGCTTTACGTCGGGATTTGCTTCATGATCATCTGTGGCTGTTTTCACTTCATCTTTAGGGTGAGCTGGTTCATTTTCCTTCTCCTTTTCCAAGCTGGAGTGTTTCTTCTCCTCTTGTTtattctcttcctcctcctgtgACTCTCTCTTCTGCTCTGGGTTTATGGAGTTGGAAATGTGATTGCTGGGACTCTCGTGTTCCTCACGCTCCTCTTCCTCAGCAATCTGGTTGGGTTTTTGAGACTCCTGCTCTGTCTCCTCACTCCCCCCTAAGCTCTCCTCTCCTGCTCCTCTCTTCTCGGCATCTTCTTTTGGTTTATCCAAGGCAACCAACATTGACTGATCATCTGCGGGA

Function

NR:

description
PREDICTED: chromogranin-A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204376 True 703 lncRNA 0.51 2 14031165 14033456

Neighbor

gene id symbol gene type direction distance location
ftr97 LOC107659198,LOC107711646,LOC107602372,LOC107583926,LOC107665304,LOC107721339 coding downstream 49819 13968392 ~ 13981346 (-)
ftr79 LOC107711621,LOC107665371,LOC107602424,LOC107665304 coding downstream 62976 13963378 ~ 13968189 (-)
mylk4b mylk4b,LOC107721383,LOC107659202,LOC107555775,LOC107665331,LOC107711643,LOC107602975 coding downstream 92747 13911717 ~ 13938418 (-)
gmds gmds,LOC107721371,LOC107711642 coding downstream 120668 13852032 ~ 13910497 (-)
exoc2 exoc2,LOC107721345,LOC107659211,LOC107711641,LOC107665386,LOC107555744 coding downstream 226794 13781126 ~ 13804371 (-)
itpk1a itpk1a,LOC107586239,LOC107659161,LOC107602955,LOC107711651,LOC107665329 coding upstream 1283 14034739 ~ 14050388 (-)
si:dkeyp-55f12.3 NA coding upstream 20966 14054422 ~ 14055315 (-)
btbd7 btbd7,LOC107659192,LOC107721332,LOC107583814,LOC107711654,LOC107602295,LOC107665372 coding upstream 28586 14062042 ~ 14106765 (-)
asb2a.1 LOC107721379,LOC107659189,LOC107583790,LOC107711656,LOC107602264 coding upstream 120287 14153743 ~ 14161562 (-)
asb2a.2 asb2a.2,LOC107659190,LOC107721380,LOC107583801,LOC107602948,LOC107711632,LOC107665367 coding upstream 129831 14163287 ~ 14168599 (-)
G138399 LOC107711644,LOC107659205,LOC107721344,LOC107602456,LOC107665390,LOC107602691,LOC107555778 non-coding downstream 31816 13941228 ~ 13999349 (-)
G138405 NA non-coding downstream 39749 13982174 ~ 13991416 (-)
G138401 LOC107721343,LOC107721342,LOC107583935,LOC107721341,LOC107659208 non-coding downstream 77278 13948128 ~ 13953887 (-)
G138407 NA non-coding downstream 85428 13945260 ~ 13945737 (-)
G138351 NA non-coding downstream 180991 13849940 ~ 13850174 (-)
G138463 NA non-coding upstream 148753 14182209 ~ 14183160 (-)
G138502 NA non-coding upstream 236267 14269723 ~ 14467414 (-)
G138537 NA non-coding upstream 393503 14426959 ~ 14428252 (-)
G138562 NA non-coding upstream 491276 14524732 ~ 14525023 (-)
G138579 NA non-coding upstream 545245 14578701 ~ 14578901 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other downstream 263341 13763335 ~ 13767824 (-)
G138285 LOC107555741,LOC107659217,LOC107665323 other downstream 339158 13664506 ~ 13692007 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other downstream 482574 13547276 ~ 13548591 (-)
cracd kiaa1211,LOC107555764,LOC107737310,LOC107665299,LOC107556121 other downstream 583777 13423958 ~ 13447388 (-)
LOC122324483 NA other downstream 766881 13260919 ~ 13264284 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other upstream 160277 14193733 ~ 14198528 (-)
LOC122324589 armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129 other upstream 408077 14441533 ~ 14445925 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other upstream 959643 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other upstream 963669 14997125 ~ 15003202 (-)
LOC122325611 NA other upstream 1808942 15842398 ~ 15842618 (-)

Expression


Co-expression Network