prph2lb (prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527)


Basic Information

Item Value
gene id prph2lb
gene name prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 14193733 ~ 14198528 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU204437
GGCGTACACATATTGACAAAATAAGTGACGTTTCTATACTTGCTAAACTAAAATAAGCTTGCACATTCATCTCAGAAATAATCTTTCAGCAAGTATCATGTACTtatagaaatatacaaatatatacagcatatattagCCATTTTCACACACTGTAAACTatccatgcatttattttgttacattttcatcTTGATTTCAGTACCTGTGCTATTATGAAGCTAAGGCCGTCATCCAGGAGTGTAAAAATACCTAACCTAAGCTGCTTATGTGGCCCTCTCGGTCTTCTCTCCCTGTTCACTTCCCTCCTCCCCGTAGAACATGCTTCCTGTCTTCTCCCGTTTACCCAGTATGTTATGtcaccc
>XM_043218764.1
tgtaCAACTATAAAATATTCCATGTTCATTTCAGTATATGACGTCTTACTGAACATGTTTTACAGTATATGTTAAAAATCAAAGACAAATTCCAGTGTGAAAATATGTACATCTGTACATTCTTGGTTCCTCCAAAGGTTTCAACCTCTGAGCATCTTAGGGAGTTTATCCTTGAACCTATGTATATGAATTGTCCCTGTTTGGGGTTTGTCTCACACATAgtaaatacataatgcattatcTATTACTGAAAGCACGGAGGGGGGCACTGATGTTATTCGCTTCGGATTGGCCCAGATGGCTTGTAAGTGTTCTGTTAAATCCTGAGGATAAATGGATTAGGTGGAGGTCACAGCGAGTCTGGACACAATTCACTCTAAACCTGCTCCTCACCTCTACTCCGGTCCCTTACctgaaatatgcaaaaaaaggGAATATGACAGCATCTACAGTCAAGGTCCACGGATTACAAGGCCATAGTGGATGTTGGAGATCTGGTACCTGTGCTATTATGAAGCTAAGGCCGTCATCCAGGAGTGTAAAAATACCTAACCTAAGCTGCTTATGTGGCCCTCTCGGTCTTCTCTCCCTGTTCACTTCCCTCCTCCCCGTAGAACATGCTTCCTGTCTTCTCCCGTTTACCCAGTATGTTATGtcaccctaaaataaaatgagcttTACATCTGGACATAAAGCAATTTACCGCTGAGACGGTAAAAGCAACATTTCCCATCGACAATGGCAGtcttaaaagtgacatttacgaagacaaacagagacaaactgGCCCAGGTTTTATGGGTCCTGAACTGGGTGTCTGTGGTAACAGGAGTCACGCTCTTCAGCCTGGGCCTGTTCTTAAAGGTGGAGATCGTGAAGAGACGGGAGCTGATGTCAAAAGAGATCGTGTCAGTTCCAAACATGCTTATCTGTGTTGGCTTGACTGCCTGTGCGATCAATTTCCTCGGGGGAAAGATCTGCTATGACTGTGTGGACACCACCAAGTTCTTGCGATGGAAGCTGCTGATGCTGCCTTACATCATATGTacctttttctttacattttgtatCCTCGTTGGAGCGCTGATGTGCTATAGCATGCGTAACGATCTGGAGGAGTCGCTGTTTTTAGGCTTGCGTGATGCCATGCGCTATTATAAGGACACGGACATGCCAGGCCGCTGCTACATCAAGCGCACAATGGACATGCTGCAGATGCAGTTTCAGTGCTGTGGCAACGGAGGCTATCGAGACTGGTTTCACATTCAGTGGATTAGCAACCGCTACCTCAATATGACCGATAGCGAAGTTGTGGAGCGACTGCGGAGTAATGTGGACGGGAAATATCTGATCGACGGAGTGCCGTTTAGCTGCTGTGGCCTGCATTCTCCTCGACCCTGCATCCAACATCAAATCACTAACAACTCAGCACACTATAATTACGACTTCCAGAAGGAGGAGCTGAACCTGAACCGGAGGGGCTGCAGACAAGCCCTGCTGGAGCACTACACACAGATAATGCAGTCTATCGGCTTAATCGTACTCATCATCTGGCTTTTTGAGGTGTCAGTGTTGACAGGAGTGCGTTATCTTCAGACCGCCATGGAGAATGTGCTGAGGTTAGGAGACCCTGACTCTGAGTCTGACGGCTGGCTTCTGGAGAACAGCATTGCGGACACTGCACGTTACAACTTCAACATCATTAAGAACCTGGGAAAGTGCTACCAGGTAGATGACGACCCCAATATAGATGTACCAAGCACCAGCCAGCAAGCACAAGAGAACGTGCCTGTAAAGCAAATCCCTGTGGCCCGGTAGCACAAGAGACATTGGACATTGAGACTTACCCAGCCATTCAACAATGGCAGCCTTGGAGAGGCAGATCAAGCTTTGCATTGACTCTGCAGCCTTTGACTTCATGCACACAAAGAGGAGTGGATGTTAAGAATGGcctgaaacaataaaacacaatgtgaAGGAGCTCTTAGCTGAAAGGCACTGCATTGCAATGTAATCCTTGtgccatacaaaaaaaaaagataatgaaatatgaattgcattttaagatGCTGGAGAACAGGACTGATTTGTAACACTGGCTAACATTGCTGTAAAGAAAGATGGTAATGGAAGACAAGCTTCTCTGTGCCTCTACCCtgtaatgaatattattttgtccatcctaaaatatatattaacgataaacacattttaatctaaaaaggGTTAATTATAGGCCTTTGTTCCATTACTAAGGAGCTATTACCATCCATAATGTATGAAATGCCTTTCTCTTTCACTCACTTGCTTTACTTGTTTCATTGTAGGTCCGTATTCAAGTTTTCCTCTAGTAAACCACTCACACATTCCTTTGGAGACTTGCAGTATCTGACAAGGATGAATTTTAACTCGATGGCTAGCAAACATCTTATTAATACGAACTGTGGCTTCCATGTGTTATTGCAGCACTACTGTTTTATATAAGCCTAAACTGTATTAAGTCTAAATTACATGTTCAATCCGTTGTGCgtttattcttttaattgtaaatttatttctcacaattgctacatttttcttatatttggTGACTAttcaaagtaaaatgttttgtcagtttttatcAGTCATTTCTCATATTCAGAAATAAAGTCAGACATCTGAGAAAGGTGTA
>XM_043218765.1
tgtaCAACTATAAAATATTCCATGTTCATTTCAGTATATGACGTCTTACTGAACATGTTTTACAGTATATGTTAAAAATCAAAGACAAATTCCAGTGTGAAAATATGTACATCTGTACATTCTTGGTTCCTCCAAAGGTTTCAACCTCTGAGCATCTTAGGGAGTTTATCCTTGAACCTATGTATATGAATTGTCCCTGTTTGGGGTTTGTCTCACACATAgtaaatacataatgcattatcTATTACTGAAAGCACGGAGGGGGGCACTGATGTTATTCGCTTCGGATTGGCCCAGATGGCTTGTAAGTGTTCTGTTAAATCCTGAGGATAAATGGATTAGGTGGAGGTCACAGCGAGTCTGGACACAATTCACTCTAAACCTGCTCCTCACCTCTACTCCGGTCCCTTACctgaaatatgcaaaaaaaggGAATATGACAGCATCTACAGTCAAGGTCCACGGATTACAAGGCCATAGTGGATGTTGGAGATCTGGGTAGTACCTGTGCTATTATGAAGCTAAGGCCGTCATCCAGGAGTGTAAAAATACCTAACCTAAGCTGCTTATGTGGCCCTCTCGGTCTTCTCTCCCTGTTCACTTCCCTCCTCCCCGTAGAACATGCTTCCTGTCTTCTCCCGTTTACCCAGTATGTTATGtcaccctaaaataaaatgagcttTACATCTGGACATAAAGCAATTTACCGCTGAGACGGTAAAAGCAACATTTCCCATCGACAATGGCAGtcttaaaagtgacatttacgaagacaaacagagacaaactgGCCCAGGTTTTATGGGTCCTGAACTGGGTGTCTGTGGTAACAGGAGTCACGCTCTTCAGCCTGGGCCTGTTCTTAAAGGTGGAGATCGTGAAGAGACGGGAGCTGATGTCAAAAGAGATCGTGTCAGTTCCAAACATGCTTATCTGTGTTGGCTTGACTGCCTGTGCGATCAATTTCCTCGGGGGAAAGATCTGCTATGACTGTGTGGACACCACCAAGTTCTTGCGATGGAAGCTGCTGATGCTGCCTTACATCATATGTacctttttctttacattttgtatCCTCGTTGGAGCGCTGATGTGCTATAGCATGCGTAACGATCTGGAGGAGTCGCTGTTTTTAGGCTTGCGTGATGCCATGCGCTATTATAAGGACACGGACATGCCAGGCCGCTGCTACATCAAGCGCACAATGGACATGCTGCAGATGCAGTTTCAGTGCTGTGGCAACGGAGGCTATCGAGACTGGTTTCACATTCAGTGGATTAGCAACCGCTACCTCAATATGACCGATAGCGAAGTTGTGGAGCGACTGCGGAGTAATGTGGACGGGAAATATCTGATCGACGGAGTGCCGTTTAGCTGCTGTGGCCTGCATTCTCCTCGACCCTGCATCCAACATCAAATCACTAACAACTCAGCACACTATAATTACGACTTCCAGAAGGAGGAGCTGAACCTGAACCGGAGGGGCTGCAGACAAGCCCTGCTGGAGCACTACACACAGATAATGCAGTCTATCGGCTTAATCGTACTCATCATCTGGCTTTTTGAGGTGTCAGTGTTGACAGGAGTGCGTTATCTTCAGACCGCCATGGAGAATGTGCTGAGGTTAGGAGACCCTGACTCTGAGTCTGACGGCTGGCTTCTGGAGAACAGCATTGCGGACACTGCACGTTACAACTTCAACATCATTAAGAACCTGGGAAAGTGCTACCAGGTAGATGACGACCCCAATATAGATGTACCAAGCACCAGCCAGCAAGCACAAGAGAACGTGCCTGTAAAGCAAATCCCTGTGGCCCGGTAGCACAAGAGACATTGGACATTGAGACTTACCCAGCCATTCAACAATGGCAGCCTTGGAGAGGCAGATCAAGCTTTGCATTGACTCTGCAGCCTTTGACTTCATGCACACAAAGAGGAGTGGATGTTAAGAATGGcctgaaacaataaaacacaatgtgaAGGAGCTCTTAGCTGAAAGGCACTGCATTGCAATGTAATCCTTGtgccatacaaaaaaaaaagataatgaaatatgaattgcattttaagatGCTGGAGAACAGGACTGATTTGTAACACTGGCTAACATTGCTGTAAAGAAAGATGGTAATGGAAGACAAGCTTCTCTGTGCCTCTACCCtgtaatgaatattattttgtccatcctaaaatatatattaacgataaacacattttaatctaaaaaggGTTAATTATAGGCCTTTGTTCCATTACTAAGGAGCTATTACCATCCATAATGTATGAAATGCCTTTCTCTTTCACTCACTTGCTTTACTTGTTTCATTGTAGGTCCGTATTCAAGTTTTCCTCTAGTAAACCACTCACACATTCCTTTGGAGACTTGCAGTATCTGACAAGGATGAATTTTAACTCGATGGCTAGCAAACATCTTATTAATACGAACTGTGGCTTCCATGTGTTATTGCAGCACTACTGTTTTATATAAGCCTAAACTGTATTAAGTCTAAATTACATGTTCAATCCGTTGTGCgtttattcttttaattgtaaatttatttctcacaattgctacatttttcttatatttggTGACTAttcaaagtaaaatgttttgtcagtttttatcAGTCATTTCTCATATTCAGAAATAAAGTCAGACATCTGAGAAAGGTGTA

Function

NR:

description
PREDICTED: photoreceptor outer segment membrane glycoprotein 2-like

GO:

id name namespace
GO:0007601 visual perception biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204437 False 365 lncRNA 0.38 1 14197398 14197762
XM_043218764.1 False 2674 mRNA 0.43 4 14193733 14198528
XM_043218765.1 True 2678 mRNA 0.43 4 14193733 14198528

Neighbor

gene id symbol gene type direction distance location
serpina10a serpina10a,LOC107659188,LOC107711658,LOC107569891,LOC107721331,LOC107665369,LOC107602246 coding downstream 596 14188793 ~ 14193137 (-)
asb2a.2 asb2a.2,LOC107659190,LOC107721380,LOC107583801,LOC107602948,LOC107711632,LOC107665367 coding downstream 25134 14163287 ~ 14168599 (-)
asb2a.1 LOC107721379,LOC107659189,LOC107583790,LOC107711656,LOC107602264 coding downstream 32171 14153743 ~ 14161562 (-)
btbd7 btbd7,LOC107659192,LOC107721332,LOC107583814,LOC107711654,LOC107602295,LOC107665372 coding downstream 86968 14062042 ~ 14106765 (-)
si:dkeyp-55f12.3 NA coding downstream 138418 14054422 ~ 14055315 (-)
LOC122324437 LOC103911517 coding upstream 2929 14201457 ~ 14205606 (-)
LOC122324587 LOC107737325,LOC107555768,LOC107556167 coding upstream 219914 14418442 ~ 14439790 (-)
LOC122324588 ccdc170 coding upstream 230900 14429428 ~ 14433800 (-)
zbtb25 zbtb25,LOC107711665,LOC107602170,LOC107668255,LOC107721290,LOC107659158 coding upstream 329995 14528523 ~ 14532800 (-)
zgc:153157 inafm2,LOC107659157,LOC107721328,LOC107562690,LOC106952300,LOC108165849 coding upstream 348143 14546671 ~ 14549563 (-)
G138463 NA non-coding downstream 10573 14182209 ~ 14183160 (-)
G138415 LOC107659195,LOC107583832,LOC107659196 non-coding downstream 160277 14031165 ~ 14033456 (-)
G138399 LOC107711644,LOC107659205,LOC107721344,LOC107602456,LOC107665390,LOC107602691,LOC107555778 non-coding downstream 194384 13941228 ~ 13999349 (-)
G138405 NA non-coding downstream 202317 13982174 ~ 13991416 (-)
G138401 LOC107721343,LOC107721342,LOC107583935,LOC107721341,LOC107659208 non-coding downstream 239846 13948128 ~ 13953887 (-)
G138502 NA non-coding upstream 71195 14269723 ~ 14467414 (-)
G138537 NA non-coding upstream 228431 14426959 ~ 14428252 (-)
G138562 NA non-coding upstream 326204 14524732 ~ 14525023 (-)
G138579 NA non-coding upstream 380173 14578701 ~ 14578901 (-)
G138627 NA non-coding upstream 594967 14793495 ~ 14793709 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other downstream 425909 13763335 ~ 13767824 (-)
G138285 LOC107555741,LOC107659217,LOC107665323 other downstream 501726 13664506 ~ 13692007 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other downstream 645142 13547276 ~ 13548591 (-)
cracd kiaa1211,LOC107555764,LOC107737310,LOC107665299,LOC107556121 other downstream 746345 13423958 ~ 13447388 (-)
LOC122324483 NA other downstream 929449 13260919 ~ 13264284 (-)
LOC122324589 armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129 other upstream 243005 14441533 ~ 14445925 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other upstream 794571 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other upstream 798597 14997125 ~ 15003202 (-)
LOC122325611 NA other upstream 1643870 15842398 ~ 15842618 (-)
LOC122325617 NA other upstream 1644370 15842898 ~ 15843118 (-)

Expression


Co-expression Network