LOC122324589 (armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129)


Basic Information

Item Value
gene id LOC122324589
gene name armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 14441533 ~ 14445925 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU204531
GGTGTTCCTACGATATGCGAGTAAATGGCACAgaTCCTTCCTGTTTGCAAAGATGGAGGCAGAGGGAACGTCGGTCCCGCGCTCACTCTCTGCTGAGTTTGAGGGGTCCTTTGCCTATCTGACCGTGAGAGACCGACTCCCAACCATACTCACAAAAGTAATAGACACATTACACCGCAATAAAGACAATTTCTTCAAAGAATATGGAGAGgagggGATCCAGGCAGAGAAGACGGCCATCTCTTTCCTGTCCAGGCTGAGGAATGAACTGCAGACAGACAAACCTGTGCTGTCTCTGACTGATAATGCAGAGGACTCCGAGGCCTGGAATGAATACTTGCGAAAACAGCAGGACCTGATGGAAGACGGGAGGCCTGTCAGCTGGTTCAAGTCACCATGGCTCTATGTGGAGTGTTACATGTACCGGCGGATCCAGGAGGCTCTGTATATGAAtCCACCGATGGATAAGTTTGACGCGTTTAAGGAGGGAAAGACACAAAGCTTCTTCCAATCTCAACAAGCCATTAAATCCCTCTGCACATACCTTCAGGAGCTCATCACCAACATGGAGAACATGACCGAGATTCAGCTGCGAGACAACCTTCTCAAATTACTCCA
>XM_043219122.1
AGGTGTTCCTACGATATGCGATCCTTCCTGTTTGCAAAGATGGAGGCAGAGGGAACGTCGGTCCCGCGCTCACTCTCTGCTGAGTTTGAGGGGTCCTTTGCCTATCTGACCGTGAGAGACCGACTCCCAACCATACTCACAAAAGTAATAGACACATTACACCGCAATAAAGACAATTTCTTCAAAGAATATGGAGAGgagggGATCCAGGCAGAGAAGACGGCCATCTCTTTCCTGTCCAGGCTGAGGAATGAACTGCAGACAGACAAACCTGTGCTGTCTCTGACTGATAATGCAGAGGACTCCGAGGCCTGGAATGAATACTTGCGAAAACAGCAGGACCTGATGGAAGACGGGAGGCCTGTCAGCTGGTTCAAGTCACCATGGCTCTATGTGGAGTGTTACATGTACCGGCGGATCCAGGAGGCTCTGTATATGAAtCCACCGATGGATAAGTTTGACGCGTTTAAGGAGGGAAAGACACAAAGCTTCTTCCAATCTCAACAAGCCATTAAATCCCTCTGCACATACCTTCAGGAGCTCATCACCAACATGGAGAACATGACCGAGATTCAGCTGCGAGACAACCTTCTCAAATTACTCCAGGTCTCTCTGTGGGGAAACAAGTGTGATCTGTCCATCTCTGCCGGTCAGGACAACTCTCAAAAGTCCAGTCCCATCGATTCTCTTCCTGATCTCCAGCGCTTCATCCTCGTGGATGACTCCAGCACGGTTTGGTCAACACTGGTTGCTTCTCAAGGATCAGGATCATCTGGGATGAAGCATGCCAGAGTGGACATTATTTTAGACAATGCTGGTTTTGAGCTCGTTACCGATCTAGTCCTTGCTGACTTTCTTGTTTCTGCAGGACTAGCCAAGCAGGTCAGATTTCATGGCAAGTCCATCCCATGGTTTGTCTCAGATGTCACCAAACAAGACTTTGAGTGGACCATCATGCAGACCGTGGCAGCCAATCACAAGTGGATGTCAGCCAGCGGTGTCCAATGGAAGCATTTCATGAAGGAGGGCACATGGTCCTACCATGACCACGCTTTTTGGACCTTGCCCCATGAGTTCTGTGACATGGCGGTGGATGCAGCTGATCTCTACAGCACTCTCCAGGGCTCTGATCTGATCCTCTTCAAAGGAGACCTTAACTACCGGAAGCTTACTGGTGATAGGAAATGGGAGCACACAGTTGCGTTTGATCAAGCGCTGAGGGGGTTCCAGCCTGCCCCTCTCTGTAGTCTCAGGACACTGAAGGCTGACGTTCAGGTGGGCttagagccaggccaggccgaGAAGCTCATCTCTCAGGATCCAGACTGGATGACTAACGGCAAATATGCTGTCATTCAGTTTTCCAGTCCACGCAGAAAACAAtagggtctttttttttaaagaaaagcgAGTCCTCACTAAAGAGGAAATTGTTGAGAATGAAGAGataaaggaataaaatgcaCTGAAGATGCTGGTTTAGTTACCAACATGCCAAACAAGTGTGGTGTTGCTTTCACTTTGCTtgtgtaaaagtttttgtttgaaaGCAAATTACATAATGAATCCAACCGATTCTGCATATCAAACACTGAAAATAGTCTTTGCTGACAACTgatcacagtatttttttttttaatatattttctgtttgcaCTGCTGATCTGTATTGTGTAAGTACAGTTACTTAAACACACAGATGTAAACgtggcaaaaaagaaaacatgataaaaatccaATGTGTTGTGTGGTAGGatacacagtaaaaaataatgaaactgaattttaaCTTCTAGTTAAAAGCTGATGACCAAAACACCTTCAGAATAGTGAAACAGGTATATGCATTTTGGGCTAAAAATGTgcagtatataattttttttcttcaaatgtaGTAATTTATGGGCGTAGCGTGGAGTGcataattgaaaataatgtataaagaataaaacaattcTAGCAGAGTGATGGCAATATGGAATGTATGAGGGTTTTGAATGTAGAGGGatgaaaaaagcacaaattcaCAATGATCTACTAATGTCATCATAAGGAAATGCTTTTTGCTTATTGGctgaaaatactgtaaaaaaatactggCCATACATATATCATCTCAGagagtttttgtttacacagttTGGATTGACTAGCACTTTCAAAGCAAGTTTACCAGgttttctggtgtgtgtttggatgAAAGCTTCACCATGATTTCTTTTAGCTTATTTATGAGCATGCTGGAAACGGATGAGAGTCAGGATATCGTGTATGTACTCATACttgttaaaatgctgttttgaaaatttaatgcAACTTAATAAAgattagaaaaacaaa
>XM_043219123.1
ATAAAGCGTATCGCGGGCTAAAGTTGACCCATGATCCTCATCAGactacaacaaaataaaatgctaactGGTCTCAGTGCAGGTGTTCCTACGATATGCGAGTAAATGGCACAgaTCCTTCCTGTTTGCAAAGATGGAGGCAGAGGGAACGTCGGTCCCGCGCTCACTCTCTGCTGAGTTTGAGGGGTCCTTTGCCTATCTGACCGTGAGAGACCGACTCCCAACCATACTCACAAAAGTAATAGACACATTACACCGCAATAAAGACAATTTCTTCAAAGAATATGGAGAGgagggGATCCAGGCAGAGAAGACGGCCATCTCTTTCCTGTCCAGGCTGAGGAATGAACTGCAGACAGACAAACCTGTGCTGTCTCTGACTGATAATGCAGAGGACTCCGAGGCCTGGAATGAATACTTGCGAAAACAGCAGGACCTGATGGAAGACGGGAGGCCTGTCAGCTGGTTCAAGTCACCATGGCTCTATGTGGAGTGTTACATGTACCGGCGGATCCAGGAGGCTCTGTATATGAAtCCACCGATGGATAAGTTTGACGCGTTTAAGGAGGGAAAGACACAAAGCTTCTTCCAATCTCAACAAGCCATTAAATCCCTCTGCACATACCTTCAGGAGCTCATCACCAACATGGAGAACATGACCGAGATTCAGCTGCGAGACAACCTTCTCAAATTACTCCAGGTCTCTCTGTGGGGAAACAAGTGTGATCTGTCCATCTCTGCCGGTCAGGACAACTCTCAAAAGTCCAGTCCCATCGATTCTCTTCCTGATCTCCAGCGCTTCATCCTCGTGGATGACTCCAGCACGGTTTGGTCAACACTGGTTGCTTCTCAAGGATCAGGATCATCTGGGATGAAGCATGCCAGAGTGGACATTATTTTAGACAATGCTGGTTTTGAGCTCGTTACCGATCTAGTCCTTGCTGACTTTCTTGTTTCTGCAGGACTAGCCAAGCAGGTCAGATTTCATGGCAAGTCCATCCCATGGTTTGTCTCAGATGTCACCAAACAAGACTTTGAGTGGACCATCATGCAGACCGTGGCAGCCAATCACAAGTGGATGTCAGCCAGCGGTGTCCAATGGAAGCATTTCATGAAGGAGGGCACATGGTCCTACCATGACCACGCTTTTTGGACCTTGCCCCATGAGTTCTGTGACATGGCGGTGGATGCAGCTGATCTCTACAGCACTCTCCAGGGCTCTGATCTGATCCTCTTCAAAGGAGACCTTAACTACCGGAAGCTTACTGGTGATAGGAAATGGGAGCACACAGTTGCGTTTGATCAAGCGCTGAGGGGGTTCCAGCCTGCCCCTCTCTGTAGTCTCAGGACACTGAAGGCTGACGTTCAGGTGGGCttagagccaggccaggccgaGAAGCTCATCTCTCAGGATCCAGACTGGATGACTAACGGCAAATATGCTGTCATTCAGTTTTCCAGTCCACGCAGAAAACAAtagggtctttttttttaaagaaaagcgAGTCCTCACTAAAGAGGAAATTGTTGAGAATGAAGAGataaaggaataaaatgcaCTGAAGATGCTGGTTTAGTTACCAACATGCCAAACAAGTGTGGTGTTGCTTTCACTTTGCTtgtgtaaaagtttttgtttgaaaGCAAATTACATAATGAATCCAACCGATTCTGCATATCAAACACTGAAAATAGTCTTTGCTGACAACTgatcacagtatttttttttttaatatattttctgtttgcaCTGCTGATCTGTATTGTGTAAGTACAGTTACTTAAACACACAGATGTAAACgtggcaaaaaagaaaacatgataaaaatccaATGTGTTGTGTGGTAGGatacacagtaaaaaataatgaaactgaattttaaCTTCTAGTTAAAAGCTGATGACCAAAACACCTTCAGAATAGTGAAACAGGTATATGCATTTTGGGCTAAAAATGTgcagtatataattttttttcttcaaatgtaGTAATTTATGGGCGTAGCGTGGAGTGcataattgaaaataatgtataaagaataaaacaattcTAGCAGAGTGATGGCAATATGGAATGTATGAGGGTTTTGAATGTAGAGGGatgaaaaaagcacaaattcaCAATGATCTACTAATGTCATCATAAGGAAATGCTTTTTGCTTATTGGctgaaaatactgtaaaaaaatactggCCATACATATATCATCTCAGagagtttttgtttacacagttTGGATTGACTAGCACTTTCAAAGCAAGTTTACCAGgttttctggtgtgtgtttggatgAAAGCTTCACCATGATTTCTTTTAGCTTATTTATGAGCATGCTGGAAACGGATGAGAGTCAGGATATCGTGTATGTACTCATACttgttaaaatgctgttttgaaaatttaatgcAACTTAATAAAgattagaaaaacaaa

Function

symbol description
armt1 Predicted to enable S-adenosylmethionine-dependent methyltransferase activity; phosphatase activity; and protein carboxyl O-methyltransferase activity. Predicted to be involved in methylation and regulation of response to DNA damage stimulus. Orthologous to human ARMT1 (acidic residue methyltransferase 1).

NR:

description
PREDICTED: protein-glutamate O-methyltransferase

GO: NA

KEGG:

id description
K23114 ARMT1; damage-control phosphatase, subfamily III

RNA

RNA id representative length rna type GC content exon number start site end site
TU204531 False 618 TUCP 0.49 5 14443592 14445844
XM_043219122.1 False 2340 mRNA 0.43 6 14441533 14445845
XM_043219123.1 True 2434 mRNA 0.43 6 14441533 14445925

Neighbor

gene id symbol gene type direction distance location
LOC122324587 LOC107737325,LOC107555768,LOC107556167 coding downstream 1743 14418442 ~ 14439790 (-)
LOC122324588 ccdc170 coding downstream 7733 14429428 ~ 14433800 (-)
LOC122324437 LOC103911517 coding downstream 235927 14201457 ~ 14205606 (-)
serpina10a serpina10a,LOC107659188,LOC107711658,LOC107569891,LOC107721331,LOC107665369,LOC107602246 coding downstream 248396 14188793 ~ 14193137 (-)
asb2a.2 asb2a.2,LOC107659190,LOC107721380,LOC107583801,LOC107602948,LOC107711632,LOC107665367 coding downstream 272934 14163287 ~ 14168599 (-)
zbtb25 zbtb25,LOC107711665,LOC107602170,LOC107668255,LOC107721290,LOC107659158 coding upstream 82598 14528523 ~ 14532800 (-)
zgc:153157 inafm2,LOC107659157,LOC107721328,LOC107562690,LOC106952300,LOC108165849 coding upstream 100746 14546671 ~ 14549563 (-)
syndig1l syndig1l,LOC107659181,LOC107602907,LOC107562693,LOC107668242,LOC107711667 coding upstream 133522 14579447 ~ 14603338 (-)
ino80 LOC107562697,LOC107721325,LOC107659179,LOC107668207 coding upstream 297030 14742955 ~ 14777822 (-)
vps18 vps18,LOC107659178,LOC107562698,LOC107739368,LOC107602125,LOC107668247 coding upstream 332751 14778676 ~ 14784182 (-)
G138537 NA non-coding downstream 13281 14426959 ~ 14428252 (-)
G138463 NA non-coding downstream 258373 14182209 ~ 14183160 (-)
G138415 LOC107659195,LOC107583832,LOC107659196 non-coding downstream 408077 14031165 ~ 14033456 (-)
G138405 NA non-coding downstream 450117 13982174 ~ 13991416 (-)
G138401 LOC107721343,LOC107721342,LOC107583935,LOC107721341,LOC107659208 non-coding downstream 487646 13948128 ~ 13953887 (-)
G138562 NA non-coding upstream 78807 14524732 ~ 14525023 (-)
G138579 NA non-coding upstream 132776 14578701 ~ 14578901 (-)
G138627 NA non-coding upstream 347570 14793495 ~ 14793709 (-)
LOC122324712 NA non-coding upstream 393132 14839057 ~ 14843736 (-)
G138812 ywhaqa,ywhaqb,LOC107721301,LOC107549101,LOC107756586,LOC107668239,LOC107733143 non-coding upstream 877647 15323572 ~ 15324280 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other downstream 243005 14193733 ~ 14198528 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other downstream 673709 13763335 ~ 13767824 (-)
G138285 LOC107555741,LOC107659217,LOC107665323 other downstream 749526 13664506 ~ 13692007 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other downstream 892942 13547276 ~ 13548591 (-)
cracd kiaa1211,LOC107555764,LOC107737310,LOC107665299,LOC107556121 other downstream 994145 13423958 ~ 13447388 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other upstream 547174 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other upstream 551200 14997125 ~ 15003202 (-)
LOC122325611 NA other upstream 1396473 15842398 ~ 15842618 (-)
LOC122325617 NA other upstream 1396973 15842898 ~ 15843118 (-)
LOC122325622 NA other upstream 1397484 15843409 ~ 15843629 (-)

Expression


Co-expression Network