G138627


Basic Information

Item Value
gene id G138627
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 14793495 ~ 14793709 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU204663
CGACTTTGTCTTATAGCAGTGATCAGCAGCAACTACTTAAAATAGCCAAGTTGTCACTTCACTAATGACTTTTGGCTAAAGGAATACAAGGTAATTTCCCAAAACGTTTTTGTCTGAacaatgtcttgttttttttttctggttcatTTGCTGCtacgagctatttaaagaaatagttcacccaaaaatgaaaatgaccccatattttacCATCC

Function

GO:

id name namespace
GO:0005102 signaling receptor binding molecular_function
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function
GO:0098772 molecular function regulator molecular_function
GO:0030354 melanin-concentrating hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204663 True 215 lncRNA 0.35 1 14793495 14793709

Neighbor

gene id symbol gene type direction distance location
vps18 vps18,LOC107659178,LOC107562698,LOC107739368,LOC107602125,LOC107668247 coding downstream 9313 14778676 ~ 14784182 (-)
ino80 LOC107562697,LOC107721325,LOC107659179,LOC107668207 coding downstream 15673 14742955 ~ 14777822 (-)
syndig1l syndig1l,LOC107659181,LOC107602907,LOC107562693,LOC107668242,LOC107711667 coding downstream 190157 14579447 ~ 14603338 (-)
zgc:153157 inafm2,LOC107659157,LOC107721328,LOC107562690,LOC106952300,LOC108165849 coding downstream 243932 14546671 ~ 14549563 (-)
zbtb25 zbtb25,LOC107711665,LOC107602170,LOC107668255,LOC107721290,LOC107659158 coding downstream 260695 14528523 ~ 14532800 (-)
pigh pigh,LOC107739364,LOC107602101,LOC107668214,LOC107562701,LOC107721283,LOC107721262 coding upstream 4239 14797948 ~ 14799539 (-)
wdr21 dcaf4,wdr21,LOC107602090,LOC107659175,LOC107562700,LOC107715145 coding upstream 14824 14808533 ~ 14813502 (-)
rgs6 rgs6,LOC107659172,LOC107602058,LOC107721319,LOC107756569,LOC108424512,LOC108257637 coding upstream 52300 14846009 ~ 14903495 (-)
sipa1l1 sipa1l1,LOC107721317,LOC107659170,LOC107668228,LOC107756605 coding upstream 114190 14907899 ~ 14971290 (-)
rab15 rab15,LOC107671782,LOC107668202,LOC106571087 coding upstream 182553 14976262 ~ 14984856 (-)
G138579 NA non-coding downstream 214594 14578701 ~ 14578901 (-)
G138562 NA non-coding downstream 268472 14524732 ~ 14525023 (-)
G138502 NA non-coding downstream 326081 14269723 ~ 14467414 (-)
G138537 NA non-coding downstream 365243 14426959 ~ 14428252 (-)
G138463 NA non-coding downstream 610335 14182209 ~ 14183160 (-)
LOC122324712 NA non-coding upstream 45348 14839057 ~ 14843736 (-)
G138812 ywhaqa,ywhaqb,LOC107721301,LOC107549101,LOC107756586,LOC107668239,LOC107733143 non-coding upstream 529863 15323572 ~ 15324280 (-)
G138811 NA non-coding upstream 538092 15331801 ~ 15347281 (-)
G138828 NA non-coding upstream 576899 15370608 ~ 15380969 (-)
G138853 NA non-coding upstream 723134 15516843 ~ 15517070 (-)
LOC122324589 armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129 other downstream 347570 14441533 ~ 14445925 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other downstream 594967 14193733 ~ 14198528 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other downstream 1025671 13763335 ~ 13767824 (-)
G138285 LOC107555741,LOC107659217,LOC107665323 other downstream 1101488 13664506 ~ 13692007 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other downstream 1244904 13547276 ~ 13548591 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other upstream 199390 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other upstream 203416 14997125 ~ 15003202 (-)
LOC122325611 NA other upstream 1048689 15842398 ~ 15842618 (-)
LOC122325617 NA other upstream 1049189 15842898 ~ 15843118 (-)
LOC122325622 NA other upstream 1049700 15843409 ~ 15843629 (-)

Expression


Co-expression Network