LOC122325494 (LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018)


Basic Information

Item Value
gene id LOC122325494
gene name LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 15990149 ~ 15993645 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU205127
GGGAGATTTGCTGCTGGCCACGGATCTCTAGCACCCAGAGCTCTACCGTTCCCGAGCCGGGTTGTTTATAACAGGGTGGGGAAGTGTGGCAGTCGTACTATAGTTCTGCTGCTGCGCATGCTAGCCGACAGACATGAGTTCACCCTCATCTCCTCTGACATACACAACAAGACCAGGCTCACCAAACGGGAACAGGAAAATCTGATTAGAAACATCAGCACGACTCCTCAGCCATTTCTTTATACCCGACACGTGCATTTTCTCAATTTTAGCAGGTTCAGAACGGATGAGCCCGTGCACATCAACGTCATCCGAGATCCCATCAACCGGTTCCTGTCCAATTATTTCTTCCGCCGCTTCGGAGACTGGAGGGGTGAAGAGAATCACGTGGTCCGGACGCCTGGGATGAAAGACGACGAGAGATACTTGGACATCAACACGTGCATCTTGGAAAGTTACCCAGAATGCTCGAACCCCCGGCTCTTCTACATTATCCCGTATTTCTGTGGGCAGCATCCTCAGTGCAGAGAGCCAGGTTTGTGGGCTCTGGAGACGGCCAAGAGGAACGTTCTGGATCATTACCTGCTGGTAGGAGTGCTGGAGGAACTTGAAGATGTGCTGCTTCTGCTGGAGAGACTCCTTCCGCACTTCTTCTCTGACGTCTTGAACATCTACAAAAGTCCAG
>TU205130
GGGAGATTTGCTGCTGGCCACGGATCTCTAGCACCCAGAGCTCTACCGTTCCCGAGCCGGGTTGTTTATAACAGGGTGGGGAAGTGTGGCAGTCGTACTATAGTTCTGCTGCTGCGCATGCTAGCCGACAGACATGAGTTCACCCTCATCTCCTCTGACATACACAACAAGACCAGGCTCACCAAACGGGAACAGGAAAATCTGATTAGAAACATCAGCACGACTCCTCAGCCATTTCTTTATACCCGACACGTGCATTTTCTCAATTTTAGCAGGTGAgttgatgcattatttattgcattcaaaat
>XM_043220533.1
TCAATGTGAACAGAAGCTTCCTGGTATGTCTCACTAATTGAATGCACCTTAATGATTCGTTAAAGTTATAAAGTGTTAGCAAAGTTGTGTTCTCGGGTCAGAGGCATCAGTCAAGGTTCATAAAGAGTGGACTGTCAAAGTTTCCTCCCTCCACTACGCGTCCATACGGCAGCAGTGTTGTTCTTGGCTTTCAGAGCAGCTCACGAGACCCACCGGCGAATTCCACACGAGTCCACGTAAACTCGTCACATGAGGCCTTTCGTTGTCCCACAATGACAGCAGTCACCAAAACCGATGGAGGAGTGGAAGAACCTGCGGATTCGACAAAGCATTAGATCTTAAAATACCAGTCTTACATTTCATTACCCAAGCTATAAAGTCAACAAATGATATGCAGCTTAATCTAAATGCATGAGTTTACTGTTGATGGATGGAGCATTTGGCATTCTTATAAGGATTCTATCACACAGAAATGTCTGCtcgtaaaatgtaatatgcacaGTACGATGGCAGGTgcctttctatttatttgttttattgaactTTTTAGGGAGATTTGCTGCTGGCCACGGATCTCTAGCACCCAGAGCTCTACCGTTCCCGAGCCGGGTTGTTTATAACAGGGTGGGGAAGTGTGGCAGTCGTACTATAGTTCTGCTGCTGCGCATGCTAGCCGACAGACATGAGTTCACCCTCATCTCCTCTGACATACACAACAAGACCAGGCTCACCAAACGGGAACAGGAAAATCTGATTAGAAACATCAGCACGACTCCTCAGCCATTTCTTTATACCCGACACGTGCATTTTCTCAATTTTAGCAGGTTCAGAACGGATGAGCCCGTGCACATCAACGTCATCCGAGATCCCATCAACCGGTTCCTGTCCAATTATTTCTTCCGCCGCTTCGGAGACTGGAGGGGTGAAGAGAATCACGTGGTCCGGACGCCTGGGATGAAAGACGACGAGAGATACTTGGACATCAACACGTGCATCTTGGAAAGTTACCCAGAATGCTCGAACCCCCGGCTCTTCTACATTATCCCGTATTTCTGTGGGCAGCATCCTCAGTGCAGAGAGCCAGGTTTGTGGGCTCTGGAGACGGCCAAGAGGAACGTTCTGGATCATTACCTGCTGGTAGGAGTGCTGGAGGAACTTGAAGATGTGCTGCTTCTGCTGGAGAGACTCCTTCCGCACTTCTTCTCTGACGTCTTGAACATCTACAAAAGTCCAGGAGGATCATTTGAGAGGCTCGTGCTGGAGTCTGACCCTGGAGCCGGGGTTTGCACTCACCGTGATCTTCGAGGCATAAGTCTGCCATTCACCTGCGGCCTGGATCTGCCCGGTGATATCATCAGATGTGACGGTGAAGCAGAGTGGGAAACTCTGTACTTCGGTGTTGACTACAGGATTTTATCCAATGGGGAAAGCAGCTCTCTTAGTAATGCAAAGATTGGCGTTACATGGTAA

Function

NR:

description
PREDICTED: uronyl 2-sulfotransferase-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205127 False 685 TUCP 0.52 6 15990874 15993096
TU205130 False 308 lncRNA 0.48 3 15992543 15993096
XM_043220533.1 True 1470 mRNA 0.48 8 15990149 15993645

Neighbor

gene id symbol gene type direction distance location
LOC122324514 rps7,LOC107668222,LOC107726469,LOC107601753 coding downstream 67292 15919584 ~ 15922857 (-)
LOC122325620 NA coding downstream 68197 15921733 ~ 15921952 (-)
LOC122325614 NA coding downstream 69148 15920781 ~ 15921001 (-)
LOC122325618 NA coding downstream 69648 15920281 ~ 15920501 (-)
LOC122325615 NA coding downstream 70149 15919780 ~ 15920000 (-)
LOC122324513 ust,LOC107693205,LOC107732646,LOC107726493,LOC107696116,LOC107601503 coding upstream 197 15993842 ~ 16001170 (-)
LOC122324509 ephx1,LOC107553477,LOC107732537,LOC107601524 coding upstream 119447 16113092 ~ 16118444 (-)
hebp2 hebp2,LOC107726446,LOC107693223,LOC107732635,LOC107602836,LOC107549119,LOC107696074 coding upstream 305629 16299274 ~ 16302044 (-)
kif25 kif25,LOC107726448,LOC107549120,LOC107696106,LOC107732626 coding upstream 308546 16302191 ~ 16310567 (-)
acat2 acat2,LOC107696107,LOC107732634,LOC107549121,LOC107693222,LOC107726488,LOC107601581 coding upstream 317241 16310886 ~ 16314723 (-)
LOC122325612 NA non-coding downstream 265919 15724010 ~ 15724230 (-)
LOC122325616 NA non-coding downstream 266866 15723063 ~ 15723283 (-)
LOC122325623 NA non-coding downstream 267380 15722550 ~ 15722769 (-)
LOC122325621 NA non-coding downstream 267884 15722046 ~ 15722265 (-)
G138862 NA non-coding downstream 279096 15684176 ~ 15711053 (-)
G138956 NA non-coding upstream 213425 16207070 ~ 16208001 (-)
G138960 NA non-coding upstream 220699 16214344 ~ 16216716 (-)
G138983 NA non-coding upstream 329761 16323406 ~ 16325753 (-)
G139029 apobb.1,LOC107693214 non-coding upstream 456881 16450526 ~ 16451893 (-)
G139032 NA non-coding upstream 461239 16454884 ~ 16455403 (-)
LOC122325613 NA other downstream 145575 15844354 ~ 15844574 (-)
LOC122325622 NA other downstream 146520 15843409 ~ 15843629 (-)
LOC122325617 NA other downstream 147031 15842898 ~ 15843118 (-)
LOC122325611 NA other downstream 147531 15842398 ~ 15842618 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other downstream 974880 14993099 ~ 15015269 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other upstream 23673 16017318 ~ 16104727 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other upstream 353556 16347201 ~ 16366799 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other upstream 461823 16455468 ~ 16462216 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other upstream 1353161 17346806 ~ 17428123 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 1807757 17801402 ~ 17824201 (-)

Expression


Co-expression Network