G138960


Basic Information

Item Value
gene id G138960
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 16214344 ~ 16216716 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU205179
TCCTTTGTACTTATTTCACCAAATGTGCTTCTCTTTCATTTTGGTTTATATAAAAAGGCACCAACTAGCGAACTGTCAggccaaaaatacataaatgaaaatctGAGTGTCCTGAATGGATAGCGATCAGAAacgaacaaatgaataaaatacatcatGTGAAGTTAGGCGCTTTATAAAATTTGTgactaaaatttatttttgcctaCTTGCATCCAAGGCCACGTTcgtgtcaaaacatttttagcaataGGGGTTTCAGCGGAAATGTtgctattaaaaacaatttgcaCAAAGTTGTAGAACATGTTTTACCCCATTTCCCAAGAATTAGGATATGGGTACTGTAACACATCGTATGCAAAGCACGCACATGACTAGAAGGGTATCACAAAAGAATCGGGAGGTACATACAGAGGAACGCAAGTTTAATCAAATATACGCTTCAAGACACTCATCCTCGAATGCATACAGATCAGATCACACTAGCAAacgatacaaaaaaaacaaaacacttcttCATGCCTTTATGGTCAGAAATTCACTGGAGTTTCCACTTTAAATATGAAGACAATTTTCAGATCAGTTGCCCTATTGCTTGTTGTCTTTTCCCCAAAAAGCTGTACTCGTAGTACCATGCCAAACGTTACGCTTTTCACTATACAAAGGCCTGAAGTCAGCGttacaaaaagtgaaaaagaaaaatacatggaAAGAACAAACACGGGGACGTTTGTAACCAATCGACTGTACACCTGACGTTAATGTAGTCTTTGGACAGCTTTTGCACGACGATCTCTATGAACACTGAATCATCACAGCTCTCGACGCTCCAACGCACTGCTTTTATTCATGGCGTGAACACAGTGTAACAGCATCTGCATCTGTATATATGGACGATGTCTGATCACAGTCGGATAGCAGTGACCCGTCTTTGACATACATTCATAAACTCGAAACATTTCACTCAACGATACAGCCAGCGACGAATCAGGAAGTGGCTTAGAGCAGATATTTGTGAAGAAAAGAAGTCTGCAAATCCTCAGGAACATCACTGTAATGATCTTCAATGCACTGAACAGTccaataaataacagaaaaaaagttaatcagCAACTCGAATGCAGAGATGCTTGTTATTTCTGCCACAGAGAACGACGAGCAGAAGTTTAAATCAGTTCTTACATGGCTGTTTGTAACTACATGCATAAAGCAACAAAGAAAATGACCAAACTGAAAGGCGAGAATATTTCAAACTACTAGCTGTGCCACATTAAAAGTCAATACTGGCGTGTGCGAAACAAAATcgaaaatacaaaaacaataaacgaACACAAATCTGGGGCTCTGTGGAGGCAGAGAAGCGAACGCCGGAGAGATGGGATAAATGTTATAGGACGTACAGACACGAACATGACCCTACTCTATCAcagagattaataaatattaaacgttTTAGACACAATCCATCCGGTTTAGAAAATGCTGCAAAATCTCCTCGCGTAAAGGCCTCCAGATCCACATTTGCGTCGTTAGAAAAGTCCCTTCCGTTCGTTTGAACTCGCACTCGCCGATGCTCTTCGGTCCTGCGTGCTGATAGGAGGAAAACGTGAGCACAGAAGCACTCCGCTGGCGGATTTACTCAGTGTTGACCTAAATAAGGAAGTACTCCGGGAGAAAGGCGTGTTAGTGTTTGCTCCGCTGTTTATTATCTGAACGCGTCGTTTGAAGGCCGTTTTAATTAGGACACTAATTTATCCCGCACCTCTTTGGATGGCATTAGAAAATGGAGGCCGAAGTTAGAATACCAAGCAGAAAAATCATAGAGTACGTCTTTTAGAGTGCAAAACAGAGGTGCCAAGCATATGGCCCATTCCTCCTGGACTCAAACAGCATGACAGATACACTCATAAACTTTGCATACACAtcgaaaacaaacacacacgcgcacgcacgcacacacacactcatgttaAATCTCTTTGTCCTTCCCCAGTAGTGGACATACCATAAATTTCCTTATATTCGATCTATCTTTCTCTCCATCTATCTCttaacattcacacacacatccctGTCCCACAGTCTTGACTCCAGGCTTATCTGGTGTAGTATACTCTGTAGTAGACGGTTTTAGACCTCCAGAGCGAGTAGGAGTTGTCGAACTTGAGCAAGTATATACCACGGCCGGGATACTGGTGACTCCCAGCGTACACCTCCTCGTGACAGTCCCGCCGGTACACCGGCACTATCTCATCCACCTGCGGTTTCCCAGCCTCTTTCTTGGCTTTTTCCTCCTCAGACTGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205179 True 2310 lncRNA 0.42 2 16214344 16216716

Neighbor

gene id symbol gene type direction distance location
LOC122324509 ephx1,LOC107553477,LOC107732537,LOC107601524 coding downstream 95900 16113092 ~ 16118444 (-)
LOC122324513 ust,LOC107693205,LOC107732646,LOC107726493,LOC107696116,LOC107601503 coding downstream 213174 15993842 ~ 16001170 (-)
LOC122325620 NA coding downstream 292392 15921733 ~ 15921952 (-)
LOC122325614 NA coding downstream 293343 15920781 ~ 15921001 (-)
LOC122325618 NA coding downstream 293843 15920281 ~ 15920501 (-)
hebp2 hebp2,LOC107726446,LOC107693223,LOC107732635,LOC107602836,LOC107549119,LOC107696074 coding upstream 82558 16299274 ~ 16302044 (-)
kif25 kif25,LOC107726448,LOC107549120,LOC107696106,LOC107732626 coding upstream 85475 16302191 ~ 16310567 (-)
acat2 acat2,LOC107696107,LOC107732634,LOC107549121,LOC107693222,LOC107726488,LOC107601581 coding upstream 94170 16310886 ~ 16314723 (-)
LOC122324754 wtap,LOC107732643,LOC107549122,LOC107693220,LOC107696108,LOC107726473,LOC107601562 coding upstream 98302 16315018 ~ 16321419 (-)
hpcal1 hpcal1,LOC107549126,LOC107696114,LOC107726415,LOC108411356,LOC105909572,LOC107601527,LOC101077504 coding upstream 218505 16435221 ~ 16443831 (-)
G138956 NA non-coding downstream 6343 16207070 ~ 16208001 (-)
G138922 NA non-coding downstream 23685 15816920 ~ 16190659 (-)
LOC122325612 NA non-coding downstream 490114 15724010 ~ 15724230 (-)
LOC122325616 NA non-coding downstream 491061 15723063 ~ 15723283 (-)
LOC122325623 NA non-coding downstream 491575 15722550 ~ 15722769 (-)
G138983 NA non-coding upstream 106690 16323406 ~ 16325753 (-)
G139029 apobb.1,LOC107693214 non-coding upstream 233810 16450526 ~ 16451893 (-)
G139032 NA non-coding upstream 238168 16454884 ~ 16455403 (-)
G139139 NA non-coding upstream 626502 16843218 ~ 16845168 (-)
G139145 NA non-coding upstream 633838 16850554 ~ 16946540 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 109617 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 220699 15990149 ~ 15993645 (-)
LOC122325613 NA other downstream 369770 15844354 ~ 15844574 (-)
LOC122325622 NA other downstream 370715 15843409 ~ 15843629 (-)
LOC122325617 NA other downstream 371226 15842898 ~ 15843118 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other upstream 130485 16347201 ~ 16366799 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other upstream 238752 16455468 ~ 16462216 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other upstream 1130090 17346806 ~ 17428123 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 1584686 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 2126747 18343463 ~ 18350122 (-)

Expression


Co-expression Network