G138961


Basic Information

Item Value
gene id G138961
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 16218168 ~ 16218370 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU205180
CCAAGGTGTGCTAACTGCAATGCTTTTAACTGCAGACTAACGAGCAGATCTAATCTGAGACAGGTGCACAATTAAGGAAAGGAAATTGACTGAATGAATCcttattttttcctcagaattgaatgattccatatttttttcctcagaaatgAATGAtcccatatttttttccctgtgcttgCTCTATAAAAGTATCGTTTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205180 True 203 lncRNA 0.35 1 16218168 16218370
Loading

Neighbor

gene id symbol gene type direction distance location
acbd3 acbd3,LOC107668205,LOC107726445,LOC107549117,LOC107693226,LOC107732644,LOC107601671 coding upstream 1863 16209100 ~ 16216305 (+)
ccr6a LOC107732631,LOC107549115,LOC107693211,LOC107726495,LOC107668252,LOC107602849 coding upstream 12124 16202698 ~ 16206044 (+)
cep43 fgfr1op,LOC107693227,LOC107549114,LOC107726485,LOC107668251 coding upstream 15622 16191434 ~ 16202546 (+)
LOC122324508 slc5a6,slc5a6a,LOC107553475,LOC107689456,LOC107690043,LOC107601523,LOC106571448 coding upstream 105423 16105979 ~ 16112745 (+)
LOC122324515 LOC107692492,LOC107733586,LOC107594069 coding upstream 112359 16105124 ~ 16105809 (+)
nhsl1b LOC107693225,LOC107732633,LOC107726444,LOC107549118,LOC107668206,LOC107601600 coding downstream 737 16219107 ~ 16297680 (+)
sod2 LOC107732630,LOC107726487,LOC107693221 coding downstream 104111 16322481 ~ 16325753 (+)
otofa otofa,LOC107696112,LOC107726465 coding downstream 162381 16380751 ~ 16427431 (+)
pdia6 LOC107732640,LOC107693218,LOC107549125,LOC107726466,LOC107601540,LOC107696113 coding downstream 211249 16429619 ~ 16435181 (+)
apobb.1 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107696115,LOC107601514 coding downstream 230906 16449276 ~ 16463963 (+)
G138878 NA non-coding upstream 224705 15992311 ~ 15993463 (+)
G138870 LOC107549110,LOC107721378,LOC107601728,LOC107668221,LOC107726467 non-coding upstream 369144 15727221 ~ 15849024 (+)
G138872 NA non-coding upstream 417656 15799988 ~ 15800512 (+)
G138871 LOC107721378,LOC107726467,LOC107601728 non-coding upstream 491094 15725725 ~ 15727074 (+)
G138860 NA non-coding upstream 612656 15605289 ~ 15605512 (+)
G138973 NA non-coding downstream 95341 16313711 ~ 16314760 (+)
G139036 NA non-coding downstream 259486 16477856 ~ 16478389 (+)
G139069 stxbp5a,LOC107601184,LOC107710208,LOC107602546,LOC107726399,LOC107696120 non-coding downstream 479937 16698307 ~ 16700980 (+)
G139081 NA non-coding downstream 541585 16759955 ~ 16760526 (+)
LOC122324686 NA non-coding downstream 693577 16911947 ~ 16944872 (+)
LOC122325444 rps7,LOC107668222 other upstream 295888 15721861 ~ 15922280 (+)
G138869 LOC107732629,LOC107726464,LOC107693230,LOC107549112,LOC107601686 other upstream 421140 15763114 ~ 15797028 (+)
aven aven,LOC107549092,LOC107756595,LOC107671777,LOC107601941 other upstream 1027949 15169355 ~ 15190219 (+)
slc10a1 slc10a1,LOC107668231,LOC107671779,LOC107756602,LOC107721315 other upstream 1202796 15003410 ~ 15015372 (+)
LOC122324585 kif26aa,LOC107721264,LOC107602192,LOC107711661,LOC107668200,LOC107569886,LOC107659150 other upstream 1947830 14210022 ~ 14270338 (+)
henmt1 henmt1,LOC107710559,LOC107698398,LOC107555628,LOC107601273,LOC107726462 other downstream 1278525 17496895 ~ 17502015 (+)
ivns1abpa ivns1abpa,LOC107732388,LOC107726450,LOC107553504,LOC107599089,LOC107696153 other downstream 1570924 17789294 ~ 17802450 (+)
il17a/f3 stmn4,LOC107698329,LOC107553446,LOC107732387,LOC107719388,LOC103148820,LOC106907996,LOC106571034,LOC106608277 other downstream 1810760 18029130 ~ 18034178 (+)
cnih3 cnih3,LOC107601529,LOC107732540,LOC106607867,LOC108440801,LOC108248696,LOC106527994,LOC106571455,LOC107095392 other downstream 2390142 18608512 ~ 18634663 (+)
srp9 srp9,LOC107553440,LOC107601484 other downstream 2540259 18758629 ~ 18760209 (+)

Expression

G138961 Expression in all Baseline Samples

Bar chart with 10 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G138961 Expression in each Bioproject

Bar chart with 2 bars.
G138961 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network