G139300


Basic Information

Item Value
gene id G139300
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 17123886 ~ 17124259 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU205685
CGGCCTTGCATTATACAAACTGATTCTCTGAATGACTTGTTAGTGTTGGCCAGCACAAGCTTTGTAAAGGGTCCAGCCACACAGACCTGTGGGCCAATCAAGCCTCACTGAGCATAAAGCATAAATGATCCCAGCTGCAGCCTACAGCCTCTAATaggaaaacaaacagagcaTGACCGTATTTACTAGCGCTAGAGAGTGCCTAtgtgcacagacacacacatacagacagcCCTCCCATTACTTAATGCAAACCTTGCAGCCAAAACTGGAGTTAATTTGGATGTATGGCTTCTGGACCACAAGCAGAGCGGTCATAAACTTGATATGTATAATTAAAGTAACAGCGTCTCCTACGAGTCCAAGTTAGAAac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205685 True 374 lncRNA 0.45 1 17123886 17124259

Neighbor

gene id symbol gene type direction distance location
nr2e1 nr2e1,LOC107602776,LOC107726424,LOC107726614,LOC107601200 coding downstream 132083 16984344 ~ 16991803 (-)
afg1lb lace1b,LOC107679503,LOC107726636,LOC107601203,LOC107726402 coding downstream 153845 16949429 ~ 16970041 (-)
foxo3b foxo3b,LOC107679488,LOC107601202,LOC107726619,LOC107601425,LOC107726429,LOC107696126 coding downstream 176708 16921638 ~ 16947178 (-)
armc2 armc2,LOC107679492,LOC107601205,LOC107696124,LOC107726616,LOC107726428,LOC107601411 coding downstream 211954 16896561 ~ 16911932 (-)
cep57l1 LOC107679495,LOC107726623,LOC107601208,LOC107696099,LOC107726414 coding downstream 265276 16855295 ~ 16858610 (-)
nbas nbas,LOC107602494,LOC108439588 coding upstream 28084 17152343 ~ 17286892 (-)
smek1 smek1,ppp4r3a,LOC107726626,LOC107555622,LOC107696138,LOC107698404,LOC107601285,LOC107726461 coding upstream 290208 17414467 ~ 17424811 (-)
paplnb LOC107698340,LOC107555612 coding upstream 304247 17428506 ~ 17440011 (-)
LOC122325537 LOC107698338,LOC107555613,LOC107726610 coding upstream 328783 17453042 ~ 17455437 (-)
rock2b LOC107555625,LOC107698402,LOC107696174,LOC107726463,LOC107726633 coding upstream 331478 17455737 ~ 17481534 (-)
LOC122325296 NA non-coding downstream 6940 17043647 ~ 17116946 (-)
G139145 NA non-coding downstream 177346 16850554 ~ 16946540 (-)
G139149 NA non-coding downstream 227503 16860326 ~ 16896383 (-)
G139148 sesn1,LOC107726430,LOC107601436 non-coding downstream 232426 16889939 ~ 16891460 (-)
G139147 sesn1,LOC107601204,LOC107679493,LOC107601436,LOC107696127,LOC107726620 non-coding downstream 263630 16859343 ~ 16860256 (-)
G139301 NA non-coding upstream 564 17124823 ~ 17125248 (-)
G139302 NA non-coding upstream 1178 17125437 ~ 17125910 (-)
G139317 NA non-coding upstream 211748 17336007 ~ 17336320 (-)
G139323 NA non-coding upstream 270605 17394864 ~ 17395998 (-)
LOC122324490 NA non-coding upstream 272083 17396342 ~ 17409495 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 661670 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 757087 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 1019159 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 1130241 15990149 ~ 15993645 (-)
LOC122325613 NA other downstream 1279312 15844354 ~ 15844574 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other upstream 222547 17346806 ~ 17428123 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 677143 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 1219204 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 1281768 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 2130475 19254734 ~ 19256272 (-)

Expression


Co-expression Network