G139387


Basic Information

Item Value
gene id G139387
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 17615793 ~ 17616508 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU205819
CCATGATTTTCAATGAAAGAATACTTTGGAGTGGAGTTCACGTCAGGAACTGTAGTGGCAACACAGTTGTCCACAAATACTCGAAGGGGGACATGGTTGTACTGCTTTACAGATGCCTGAATATTTATGATGTCACTCAGGAAGAAGACATTTGAAGCCCTTTCTAACGTCCAATCATCAATCTTCAGTGAAAAGACCAGAATATCCTCTGCAACCTTGGTGGACTGATATGGGATCCAAGATGGTTTCAGTTCATTACTGCTCACATTCTGTCTCCTATATTGAAATTTATTCAGCTTCAGAACACTTGAATGGCAAAGCGATACTAGCCCACCACCACCcacaaataaagttataaagaCCTGGGGTAGTGGCATTCAATACCAATTGAAGCTCCCCTGGACCTTACAATAGGAATGTTCTGTAACTCCGCTGGTCTATAATCAAGGGTATAAATATAGACAAGCTCCTCTTCAGTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205819 True 481 lncRNA 0.42 2 17615793 17616508

Neighbor

gene id symbol gene type direction distance location
LOC122324568 NA coding downstream 6848 17603658 ~ 17608945 (-)
LOC122324572 NA coding downstream 13368 17597393 ~ 17602425 (-)
LOC122324570 LOC107579823 coding downstream 19807 17586384 ~ 17595986 (-)
atf6 atf6,LOC107555632,LOC107698395,LOC107710557,LOC107726471,LOC107601246,LOC107696152 coding downstream 60846 17523618 ~ 17554947 (-)
fam102bb fam102bb,fam102b,LOC107555630,LOC107698400,LOC107696175,LOC107601256 coding downstream 100313 17499479 ~ 17515480 (-)
scyl3 scyl3,LOC107698387,LOC107726436,LOC107599096,LOC107732421,LOC107553510,LOC107696147 coding upstream 12923 17629431 ~ 17635856 (-)
tprb LOC107732389,LOC107553507,LOC107696139,LOC107599094 coding upstream 28470 17644978 ~ 17662064 (-)
pdcb pdcb,LOC107553506,LOC107698383,LOC107732392,LOC107726497,LOC107696164,LOC107599093 coding upstream 46994 17663502 ~ 17666366 (-)
ptgs2b ptgs2b,LOC107732418,LOC107698381,LOC107553505,LOC107599092,LOC107726413,LOC107696154 coding upstream 62695 17679203 ~ 17682955 (-)
hmcn1 hmcn1,LOC107732365,LOC107698379,LOC107726475,LOC107696172,LOC107553432 coding upstream 88410 17704918 ~ 17772741 (-)
G139386 NA non-coding downstream 94 17615148 ~ 17615699 (-)
LOC122324574 NA non-coding downstream 56323 17555855 ~ 17559470 (-)
LOC122324490 NA non-coding downstream 206298 17396342 ~ 17409495 (-)
G139323 NA non-coding downstream 219795 17394864 ~ 17395998 (-)
G139317 NA non-coding downstream 279473 17336007 ~ 17336320 (-)
G139565 NA non-coding upstream 172690 17789198 ~ 17794072 (-)
G139567 ivns1abpa,LOC107696153,LOC107726450,LOC107732388,LOC107553504,LOC107683098,LOC107599089 non-coding upstream 178976 17795484 ~ 17799866 (-)
G139590 NA non-coding upstream 272060 17888568 ~ 18180187 (-)
LOC122324448 NA non-coding upstream 277228 17893736 ~ 17907615 (-)
G139591 NA non-coding upstream 470704 18087212 ~ 18107403 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 187670 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 1153577 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 1248994 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 1511066 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 1622148 15990149 ~ 15993645 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 184894 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 726955 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 789519 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 1638226 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 1644958 19261466 ~ 19262952 (-)

Expression


Co-expression Network