G139706 (LOC107683600,LOC107601464)


Basic Information

Item Value
gene id G139706
gene name LOC107683600,LOC107601464
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 18406027 ~ 18446949 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU206351
GGACACTTATGTTTTACAGAAATCCTGGATATCCTTATGAAATTCCAAATGTTGAGGAAATTATGTGATTGCAATTTACTTTGAGTATGAAACATGGCTATTGAAGTAAGAATCGTCATGGCTATCCTGCTGTCTCATGTGTGCCTTGTGGAAACTTTCGATTTTTTAGGAAAAAGCCTGGATTTACAGTTTAGCTACACAGATGGAGCAGTGCATCATATTGGACGAAGGAGTGCAGaTCCAGTGGTATACATCATGGTCGTTGAAGTGAATGCATCTGAAACTATTGCAATCAGCGAAATCAGATCTTTAGTGAATTCTGTCGTACTTCCATTTCAAGTGGACAGTGATGTTGAAATTACAGCTTTCAACCTTTCGACAGTGTGTTCCCTGAATGAAACCCAGTATCAGTGTAAATGTGAGGGTCTGTTTGTTTGGCCGAATGACACGTGTTACTTATACGAGGCCTGTGATGTCATCACTGATGGTTCATGTACATGTATCAATGCCCTTCCAACCGACGGACAGTTCTGCCAAGTACTACCTTCTAAATACGTGATTGACATTGATTTGAGATTCTTTGACTTGTTCCTGGTGGATTACTTAAGAAATCTCGTCAGAAATATCAGCCTGCCTTTGACTCTGAGAAACAGCATTAATATCACAGACATCGATATGAATACTG
>TU206365
CAGTGTGTGGGTTAAATGGAACAGAATATGAGTGCCAGTGTGAGCAGGATCATGTCTGGCCCAGTGACACCTGCAGAGCCTAtcaggtgtgtgatggcattgTGGGAGGCACTTGTGGATGTATTCAAGCTCTCCCTTCAGAGGGTCCACTTTGCCTGAAAGatatcAATGAATGTAAAGATGCAGTGTCAGTGTGTGGTCCATACTCAGATTGTATTAACTTCATTGGGAGTCACATGTGTTCATGCTGGAGTGGATTTAATACCTCCAATAAAGACAGTCCTGTGAGCCGTAACAACTCATGTCAGGatataaatgaatgtCTGTTCAGTTCACCTGTATGTGGTCCAAATTCCATCTGCACAAATCAGCTGGGAAGTTATAATTGTTCATGTCTGGATGGGTTCACTGCAACAAACTCACTTCTCCTCATCAGCAACAATAACACATGTAGAGATGTGAATGAATGTCTTCAGACGACGGAGGTCTGTGGTCCAAACTCTCGTTGCACAAACTTAATTGGGAGTTACAGCTGTTCCTGCTTGACTGGATATACAGTAACAAATAGCAGTGAACTAGTCAGGGCCAGGAACCCATGCAATGTGACTCTGCCTTTGACTGAGTATCTGATTGAAATTCAGATCAATAGCATGGACAGCAGAATGACTGATCAGCTGAGGAACATCCTGATGTATTTCAGTTTGCCCTACACAATCAGTGACAGCACTAACATCACAGAAATCAACATAACTACTG

Function

NR:

description
PREDICTED: fibrillin-2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206351 False 685 TUCP 0.40 6 18406027 18446949
TU206365 True 756 TUCP 0.44 5 18406754 18442292

Neighbor

gene id symbol gene type direction distance location
LOC122325497 adgrf6,LOC107683600 coding downstream 208 18401166 ~ 18405819 (-)
adgrf6 LOC107683600 coding downstream 4837 18366767 ~ 18401190 (-)
LOC122324297 LOC107683599 coding downstream 42166 18354170 ~ 18363861 (-)
pla2g7 pla2g7,LOC107698350,LOC107732404,LOC107553483,LOC107696191,LOC107601536 coding downstream 74975 18325927 ~ 18331052 (-)
fzd3a LOC107732395,LOC107599066,LOC107553488,LOC107719091 coding downstream 174972 18214570 ~ 18231055 (-)
tnfrsf21 tnfrsf21,LOC107732417,LOC107553479,LOC107732538,LOC107690036,LOC107698348 coding upstream 6759 18453708 ~ 18473259 (-)
ptchd4 ptchd4,LOC107732542,LOC107601530,LOC107690039,LOC107553442,LOC107732383,LOC107698346 coding upstream 81489 18528438 ~ 18555294 (-)
LOC122325333 spats1,LOC107553422,LOC107736684,LOC107601458 coding upstream 157702 18604651 ~ 18607543 (-)
si:dkey-1j5.4 si:dkey-1j5.4,LOC107698321,LOC107732379,LOC107553441,LOC107732529 coding upstream 214560 18661509 ~ 18669079 (-)
lbr LOC107732420,LOC107553478,LOC107698344,LOC107601526,LOC107732539,LOC107690042 coding upstream 224003 18670952 ~ 18679703 (-)
G139704 NA non-coding downstream 63697 18342047 ~ 18342330 (-)
G139702 mep1a.2,LOC107601466,LOC107719099,LOC107696095 non-coding downstream 64844 18340729 ~ 18341183 (-)
G139701 NA non-coding downstream 65783 18340029 ~ 18340244 (-)
G139700 mep1a.2,LOC105894426,LOC107696095,LOC107601466,LOC107719099,LOC106571460 non-coding downstream 66517 18339274 ~ 18339510 (-)
G139681 NA non-coding downstream 92422 18255858 ~ 18313605 (-)
LOC122324299 NA non-coding upstream 2995 18449944 ~ 18452132 (-)
G139790 NA non-coding upstream 151745 18598694 ~ 18598912 (-)
G139798 cnih3,LOC106527994,LOC108248696,LOC106607867,LOC107095392,LOC107732540,LOC107601529 non-coding upstream 180358 18627307 ~ 18634666 (-)
G139801 NA non-coding upstream 222489 18669438 ~ 18670933 (-)
G139823 NA non-coding upstream 377931 18824880 ~ 18829799 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other downstream 55905 18343463 ~ 18350122 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other downstream 581826 17801402 ~ 17824201 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 977904 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 1943811 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 2039228 16347201 ~ 16366799 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 807785 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 814517 19261466 ~ 19262952 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other upstream 851285 19298234 ~ 19303968 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other upstream 1154583 19601532 ~ 19615202 (-)
G140227 cad other upstream 1610675 20057624 ~ 20059603 (-)

Expression


Co-expression Network