G139708 (adgrf6,LOC107683600)


Basic Information

Item Value
gene id G139708
gene name adgrf6,LOC107683600
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 18405804 ~ 18411854 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU206385
gtgtgttCCCTGAATGAAACCCAGTATCAGTGTAAATGTGAGGGTCTGTTTGTTTGGCCGAATGACACGTGTTACTTATACGAGGCCTGTGATGTCATCACTAATGGTTCATGTACATGTATCAATGCCCTTCCAACCGACGGACAGTTCTGCCAGTTAAAAGAAGTGCTGCCTTCTCACTACACGATTGACTTTGATGTGAGATTCTTTGACTTGTATCTGGCAGACTACTTACGTAATATCTTCACAAACCTTAGCCTTCCTCTCACTTTGAGCAACAGCATAAATATCACAGATATCGACATGACTACTGTGTGTGGGTTAAATGGAACAGAATATGAGTGCCAGTGTGAGCAGGATCATGTCTGGCCCAGTGACACCTGCAGAGCCTAtcaggtgtgtgatggcattgTGGGAGGCACTTGTGGATGTATTCAAGCTCTC

Function

symbol description
adgrf6 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in eye; integument; muscle; and testis.

NR:

description
PREDICTED: fibrillin-2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206385 True 444 lncRNA 0.45 3 18405804 18411854

Neighbor

gene id symbol gene type direction distance location
adgrf6 LOC107683600 coding downstream 4614 18366767 ~ 18401190 (-)
LOC122324297 LOC107683599 coding downstream 41943 18354170 ~ 18363861 (-)
pla2g7 pla2g7,LOC107698350,LOC107732404,LOC107553483,LOC107696191,LOC107601536 coding downstream 74752 18325927 ~ 18331052 (-)
fzd3a LOC107732395,LOC107599066,LOC107553488,LOC107719091 coding downstream 174749 18214570 ~ 18231055 (-)
lft1 LOC107732386,LOC107698358,LOC107553491,LOC107719108,LOC107599070,LOC107696102 coding downstream 242479 18161260 ~ 18163325 (-)
LOC122324298 LOC107698314,LOC107553424,LOC107683599 coding upstream 7937 18419791 ~ 18431680 (-)
LOC122324295 LOC107690046,LOC107732525,LOC107601462 coding upstream 19979 18431833 ~ 18447372 (-)
tnfrsf21 tnfrsf21,LOC107732417,LOC107553479,LOC107732538,LOC107690036,LOC107698348 coding upstream 41854 18453708 ~ 18473259 (-)
ptchd4 ptchd4,LOC107732542,LOC107601530,LOC107690039,LOC107553442,LOC107732383,LOC107698346 coding upstream 116584 18528438 ~ 18555294 (-)
LOC122325333 spats1,LOC107553422,LOC107736684,LOC107601458 coding upstream 192797 18604651 ~ 18607543 (-)
G139704 NA non-coding downstream 63474 18342047 ~ 18342330 (-)
G139702 mep1a.2,LOC107601466,LOC107719099,LOC107696095 non-coding downstream 64621 18340729 ~ 18341183 (-)
G139701 NA non-coding downstream 65560 18340029 ~ 18340244 (-)
G139700 mep1a.2,LOC105894426,LOC107696095,LOC107601466,LOC107719099,LOC106571460 non-coding downstream 66294 18339274 ~ 18339510 (-)
G139681 NA non-coding downstream 92199 18255858 ~ 18313605 (-)
LOC122324299 NA non-coding upstream 38090 18449944 ~ 18452132 (-)
G139790 NA non-coding upstream 186840 18598694 ~ 18598912 (-)
G139798 cnih3,LOC106527994,LOC108248696,LOC106607867,LOC107095392,LOC107732540,LOC107601529 non-coding upstream 215453 18627307 ~ 18634666 (-)
G139801 NA non-coding upstream 257584 18669438 ~ 18670933 (-)
G139823 NA non-coding upstream 413026 18824880 ~ 18829799 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other downstream 55682 18343463 ~ 18350122 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other downstream 581603 17801402 ~ 17824201 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 977681 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 1943588 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 2039005 16347201 ~ 16366799 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 842880 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 849612 19261466 ~ 19262952 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other upstream 886380 19298234 ~ 19303968 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other upstream 1189678 19601532 ~ 19615202 (-)
G140227 cad other upstream 1645770 20057624 ~ 20059603 (-)

Expression


Co-expression Network