G139871


Basic Information

Item Value
gene id G139871
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 19040790 ~ 19043914 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU206615
taaaagaacatttattgtCGATCGTAGCGATGCATAACTATTGTCAGAAAACAGTTACTTTGCAAACTAACTGCAGAATCCTGTCACCTGAAGCATACACACAGAAGTGAACGGAAAGTAGTAAAAGTAGTTAAGGGCAAAGTGTCTCTAAAGCTCCTGTTGCAGAGAGGTCGAGTTAAGATGAGAATTCCTGCTTAAAAGATATCTCGAGACATGCTTCCATGTCCATGCATATCTAATCAAACAGTtgtgaaaaaatacattaaagcacCTCAAACCATGAATATGTATAAACACTTCAGAATTTGAAAGGGTCTTTCACATGCACCTGATTTTTTTAGTGTAGTGTATCTGTATTTCATCGGGCGAGTAATGAGCAACTATTGACATCCAATACGGCAGAAACAGATGTTGTATTGAGTGATGGGGGGGCGTCCTGTGGCGTGCCTCTTTTTGATACAGATGAGGCTAAGGAAAAGGCCCTTTTTCAGTTCTTCTGGGCCAGATCTCTGATAAAGTGGTTTGGGGGGGGACAGCACAATGGTCTTATTCTTTGCCAGTGGTTAGTAGCTTCAGGGCCTTCTGCAGATTCTGGACGGCAGTACCCACATCCTCATACTGCAGTGCACTGCCtgcatatttacagtatttctgaGCCCGAGTAAAGTCTTCTGGTGTGAGCCGAACATCacctgGGTATTGTTTAGAAGTGAAGGATCGACCACTGGCATGCTTCGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206615 True 740 lncRNA 0.43 2 19040790 19043914

Neighbor

gene id symbol gene type direction distance location
nmbr nmbr,LOC107553439,LOC107727594,LOC107689462,LOC107675069,LOC107717045,LOC107558933 coding downstream 30611 19000843 ~ 19010179 (-)
cited2 cited2,LOC107558941,LOC107727673,LOC107689449,LOC107553469 coding downstream 166781 18871665 ~ 18874009 (-)
txlnba LOC107689450,LOC107710955,LOC107675104,LOC107558940,LOC107553470,LOC107727608 coding downstream 176754 18846395 ~ 18864036 (-)
slc25a27 slc25a27,LOC107710953 coding downstream 200466 18833395 ~ 18840324 (-)
ptrhd1 ptrhd1 coding downstream 209217 18830424 ~ 18831573 (-)
trnaf-gaa_119 NA coding upstream 32132 19076046 ~ 19076118 (-)
si:ch211-202p1.5 LOC107689457,LOC107727565,LOC107717067,LOC107675103,LOC107558944,LOC107553437 coding upstream 38631 19082545 ~ 19087185 (-)
hivep2a hivep2a,LOC107553466,LOC107689444,LOC107727600,LOC107716448,LOC107558946,LOC107675072 coding upstream 52365 19096279 ~ 19166008 (-)
adat2 adat2,LOC107689443,LOC107727656,LOC107553463,LOC107716491 coding upstream 135895 19179809 ~ 19232817 (-)
nsl1 nsl1,LOC107553458,LOC107676260,LOC107558949,LOC107675087 coding upstream 212774 19256688 ~ 19258698 (-)
G139823 NA non-coding downstream 210991 18824880 ~ 18829799 (-)
G139801 NA non-coding downstream 369857 18669438 ~ 18670933 (-)
G139798 cnih3,LOC106527994,LOC108248696,LOC106607867,LOC107095392,LOC107732540,LOC107601529 non-coding downstream 406124 18627307 ~ 18634666 (-)
G139790 NA non-coding downstream 441878 18598694 ~ 18598912 (-)
LOC122324299 NA non-coding downstream 588658 18449944 ~ 18452132 (-)
G139903 NA non-coding upstream 115924 19159838 ~ 19160157 (-)
G139940 NA non-coding upstream 180466 19224380 ~ 19250790 (-)
G140152 NA non-coding upstream 291165 19335079 ~ 19341060 (-)
G140175 NA non-coding upstream 401914 19445828 ~ 19448712 (-)
G140240 adat2,LOC107727656,LOC107553463,LOC107689443,LOC107716491 non-coding upstream 693026 19736940 ~ 19740363 (-)
G139706 LOC107683600,LOC107601464 other downstream 593841 18406027 ~ 18446949 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other downstream 690668 18343463 ~ 18350122 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other downstream 1216589 17801402 ~ 17824201 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 1612667 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 2578574 16455468 ~ 16462216 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 210820 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 217552 19261466 ~ 19262952 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other upstream 254320 19298234 ~ 19303968 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other upstream 557618 19601532 ~ 19615202 (-)
G140227 cad other upstream 1013710 20057624 ~ 20059603 (-)

Expression


Co-expression Network