G140248


Basic Information

Item Value
gene id G140248
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 19800522 ~ 19801668 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU207134
GAAACCGCGGAGAAAGGTTGCGTAGTTGAAGTAGAGCTCCTGATTAAGGAAAATATACTTtacaaaagtaaagtaaagattttgtttttgtagcgATTCAAGAGGGGAGATTTTGATTGCTAACATCCAGTTATTATTTTCGTTTCAaaggattttgttttttgagtttcGCGAGGGAATACTGGATATGGTCAGGTTTTTTCCGTGGATTTGCGttggatgttttctttgatgGCGAGCCGACCGAATCGAATCTGAAAGGAGACCAAAGTTACCAGAACTGGAAATTTACCTTTTCTCTTCAAAAGGAAAGGATTTCAGAAGACATTGTGGACAGTGAATTACTGCTACGTCGTTGGATTTGAGATAAGTGATTGACAAACGGAACTAATCTCAAAAGATTTGAACAGGTTTGAACCTACTCCGGAAAGAGGATTCTTTAAGGGATATATTTTGTACGGTGAATGTCGATTATATATCCGAAAATTACAGTTAATTCATTGTGTGAGTAACAGAAAATATACCACCAAAGATTCATTTGAGTACTCAAGGaaccagtgttattttcatttcaattttatattggaatctgttttatttacgttgtgatttgtttattttttcttttattttgttttattattttatttattatgttttatatacttagggg
>TU207139
GAAACCGCGGAGAAAGGTTGCGTAGTTGAAGTAGAGCTCCTGATTAAGGAAAATATACTTtacaaaagtaaagtaaagattttgtttttgtagcgATTCAAGAGGGGAGATTTTGATTGCTAACATCCAGTTATTATTTTCGTTTCAaaggattttgttttttgagtttcGCGAGGGAATACTGGATATGGTCAGGTTTTTTCCGTGGATTTGCGttggatgttttctttgatgGCGAGCCGACCGAATCGAATCTGAAAGGAGACCAAAGTTACCAGAACTGGAAATTTACCTTTTCTCTTCAAAAGGAAAGGATTTCAGAAGACATTGTGGACAGTGAATTACTGCTACGTCGTTGGATTTGAGATAAGTGATTGACAAACGGAACTAATCTCAAAAGATTTGAACAGGTTTGAACCTACTCCGGAAAGAGGATTCTTTAAGGGATATATTTTGTACGGTGAATGTCGATTATATATCCGAAAATTACAGTTAATTCATTGTGTGAGTAACAGAAAATATACCACCAAAGATTCATTTGAGTACTCAAGGaaccagtgttattttcatttcaattttatattggaatctgttttatttacgttgtgatttgtttattttttcttttattttgttttattattttatttattatgttttatatacttaggggtaatttgattaaaagtatACTTGCTATAAAACCTGATTGTGAGTTTCAGTGATTTCCTATCTCCAGAGGGCCGCTCCTATATTTCTGAGTCGCAGTTAGATTAAACAGTGGAACAAGATATTAAgagcaatacatttaattga

Function

GO:

id name namespace
GO:0005856 cytoskeleton cellular_component
GO:0015629 actin cytoskeleton cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207134 False 673 lncRNA 0.34 2 19800665 19801668
TU207139 True 816 lncRNA 0.34 2 19800522 19801668

Neighbor

gene id symbol gene type direction distance location
LOC122324982 si:dkey-221h15.4,LOC107602180,LOC107676237,LOC107727604,LOC107727605 coding downstream 149393 19649188 ~ 19651129 (-)
cad cad coding downstream 153434 19628786 ~ 19647088 (-)
dnajc5ga dnajc5g,dnajc5ga,LOC107727634,LOC107675096,LOC107716684,LOC107598061,LOC103043078 coding downstream 172495 19616761 ~ 19628027 (-)
slc30a2 slc30a2,slc30a3,LOC107598103,LOC107675070 coding downstream 246195 19542377 ~ 19554327 (-)
si:ch211-245h14.1 NA coding downstream 283999 19514080 ~ 19516523 (-)
LOC122325502 galnt14,LOC107716567,LOC107676246,LOC107727639,LOC107675076 coding upstream 25432 19827100 ~ 19849045 (-)
LOC122324484 LOC107602180,LOC107676237,LOC107727604 coding upstream 267738 20069406 ~ 20071277 (-)
rcan2 rcan2,LOC107602203,LOC107727622,LOC107675064,LOC107598065,LOC107676238,LOC108429336,LOC105901692 coding upstream 371880 20173548 ~ 20229821 (-)
LOC122325054 cyp39a1,LOC107727679,LOC107676273,LOC107602202 coding upstream 429307 20230975 ~ 20242311 (-)
clu LOC107602200,LOC107727630,LOC107676249,LOC107675063,LOC107716747,LOC107598069 coding upstream 456585 20258253 ~ 20263850 (-)
G140240 adat2,LOC107727656,LOC107553463,LOC107689443,LOC107716491 non-coding downstream 60159 19736940 ~ 19740363 (-)
G140175 NA non-coding downstream 351810 19445828 ~ 19448712 (-)
G140152 NA non-coding downstream 459462 19335079 ~ 19341060 (-)
G139940 NA non-coding downstream 549732 19224380 ~ 19250790 (-)
G139903 NA non-coding downstream 640365 19159838 ~ 19160157 (-)
G140265 ehd3,LOC107716590,LOC107675095,LOC107727655,LOC103043599,LOC106520014 non-coding upstream 103963 19905631 ~ 19909647 (-)
G140304 NA non-coding upstream 346612 20148280 ~ 20167998 (-)
G140315 NA non-coding upstream 465000 20266668 ~ 20268266 (-)
G140328 NA non-coding upstream 484812 20286480 ~ 20286995 (-)
G140413 NA non-coding upstream 824987 20626655 ~ 20626863 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other downstream 185320 19601532 ~ 19615202 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other downstream 496554 19298234 ~ 19303968 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other downstream 537570 19261466 ~ 19262952 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other downstream 544250 19254734 ~ 19256272 (-)
G139706 LOC107683600,LOC107601464 other downstream 1353573 18406027 ~ 18446949 (-)
G140227 cad other upstream 255956 20057624 ~ 20059603 (-)
G140277 cad,LOC107602171 other upstream 259934 20061602 ~ 20062977 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other upstream 608961 20410629 ~ 20542249 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other upstream 832628 20634296 ~ 20658380 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other upstream 1166520 20968188 ~ 20975755 (-)

Expression


Co-expression Network