G140304


Basic Information

Item Value
gene id G140304
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 20148280 ~ 20167998 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU207209
TTgaattatacagtttttattcatatacaaCAATGTGTCATGTAGTTCTGGGTATTGCAGCGGTGATTGTTTTAGTTAAGGCAAGTTAATATTGTTCAATCGCAGAACAGGAGAAGCGTGCTAATTTTTACTCTTCAGTCCTATTGGACAGGAGACCCCGGTGCCGCCCAGTCCACAGTAGCCATCAGGGGATACCTTCTGATACTCATTCTTGGAGCGCACTGCCTGGTCAAGCTGTTCCTGTGTGTAAGCGTAGATGACTGATCGATAGGTCGTCCCAACATCGTTGCCTTGTCGCATTcctttcaaagaaaatacagatacGTCAATGTTAAAAACGGAGCGTTTCAGGATCTggttacaaaacaaatgtaaatggtTAAACTATTTCTTGATATTCAATTTTACACTCTATATAGATATCTGCGAAGTAAAGTAAGTCGTGTCACCCTGATGTAATCATGCAGTTCAGTCCAGAATTAGCATCTATTAGTACTTTAGTCTCTTGGGAAACAAACTCCCAATCAACCAGATATGAAATCTTGGGAAGAGTGCGGTTTTAATTAAAGCTCCGTTCTATCTGTTCTTGATCCAGATATGACTTCATAGATTCTGCATAGATATTTTTGTTGGATGAGAAGACGGCATTAACTGTGCTAAGAAGCTGGATAGGACTGGAGCCTTTGCCTTATGtgaatgtacattattttaaacacttcTGACCTgtaaaacttttctttaaatTACTTAAACCGAACCGTAATGATTTCAGTGTGAACATATATAAGACTGAACTGAGTGTTAGTCATCACCACAGACACAATCAGGGCATTATACAGGCCATCTCCATCAGTCTGAATGTGATTGGATGGTCGAGACACTTTAATCTCTGATCTGAATCCTTTGGTCATGATTGCAGCCACTCAAACTGTTGCCTCTCCTCTTTGTGAATTCATGATGGGCCTCTCGTACCTCTCAAACTACTGGAACTTAAGACTGTATTAAGTTAAAgggctgctctttttttttttttttttttacaggcttttaaatagctttttgtgCTCAGCCTTTTTTACATCAACACTGTGCTAAGCAAAATTGACTGTGTAATGTATTGGCTTTCAACTAATAATGAACTAAATATGATCCTAAAGAGAGAGTTTACCCAAAGAGGACAAATTTAGTTATTTACTCAAATCCTTTTTCTGTACagctccatatatatatatatatatatatatatatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207209 True 1260 lncRNA 0.37 2 20148280 20167998

Neighbor

gene id symbol gene type direction distance location
LOC122324484 LOC107602180,LOC107676237,LOC107727604 coding downstream 77003 20069406 ~ 20071277 (-)
LOC122325502 galnt14,LOC107716567,LOC107676246,LOC107727639,LOC107675076 coding downstream 299235 19827100 ~ 19849045 (-)
LOC122324982 si:dkey-221h15.4,LOC107602180,LOC107676237,LOC107727604,LOC107727605 coding downstream 497151 19649188 ~ 19651129 (-)
cad cad coding downstream 501192 19628786 ~ 19647088 (-)
dnajc5ga dnajc5g,dnajc5ga,LOC107727634,LOC107675096,LOC107716684,LOC107598061,LOC103043078 coding downstream 520253 19616761 ~ 19628027 (-)
rcan2 rcan2,LOC107602203,LOC107727622,LOC107675064,LOC107598065,LOC107676238,LOC108429336,LOC105901692 coding upstream 5550 20173548 ~ 20229821 (-)
LOC122325054 cyp39a1,LOC107727679,LOC107676273,LOC107602202 coding upstream 62977 20230975 ~ 20242311 (-)
clu LOC107602200,LOC107727630,LOC107676249,LOC107675063,LOC107716747,LOC107598069 coding upstream 90255 20258253 ~ 20263850 (-)
ccdc25 ccdc25,LOC107727664,LOC107602198,LOC107676265,LOC107675065,LOC107598073,LOC107716775 coding upstream 125296 20293294 ~ 20296159 (-)
pbk pbk,LOC107598104,LOC107717112,LOC107727585,LOC107676230,LOC107602197 coding upstream 133408 20301406 ~ 20304874 (-)
G140265 ehd3,LOC107716590,LOC107675095,LOC107727655,LOC103043599,LOC106520014 non-coding downstream 238633 19905631 ~ 19909647 (-)
G140248 NA non-coding downstream 346612 19800522 ~ 19801668 (-)
G140240 adat2,LOC107727656,LOC107553463,LOC107689443,LOC107716491 non-coding downstream 407917 19736940 ~ 19740363 (-)
G140175 NA non-coding downstream 699568 19445828 ~ 19448712 (-)
G140152 NA non-coding downstream 807220 19335079 ~ 19341060 (-)
G140315 NA non-coding upstream 98670 20266668 ~ 20268266 (-)
G140328 NA non-coding upstream 118482 20286480 ~ 20286995 (-)
G140413 NA non-coding upstream 458657 20626655 ~ 20626863 (-)
G140449 NA non-coding upstream 568590 20736588 ~ 20791701 (-)
LOC122324961 NA non-coding upstream 824523 20992521 ~ 20995513 (-)
G140277 cad,LOC107602171 other downstream 85303 20061602 ~ 20062977 (-)
G140227 cad other downstream 88677 20057624 ~ 20059603 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other downstream 533078 19601532 ~ 19615202 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other downstream 844312 19298234 ~ 19303968 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other downstream 885328 19261466 ~ 19262952 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other upstream 242631 20410629 ~ 20542249 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other upstream 466298 20634296 ~ 20658380 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other upstream 800190 20968188 ~ 20975755 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other upstream 921406 21089404 ~ 21091008 (-)
G140616 NA other upstream 1030712 21198710 ~ 21278741 (-)

Expression


Co-expression Network