G140413


Basic Information

Item Value
gene id G140413
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 20626655 ~ 20626863 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU207356
ggaGAAAAGCAATACCTGACTCTtctattttattgatttagttTTGAAAACTGAACAAATTTCAAGGCACttcaaaatccatttttttgttttgttttttttatctttgtaatcattgtaattgtttttacttGAATAAATGTGTAGTTGCACAAATAATTATTCGTTATTTTTCTagagactttttaaaataaaactgaacctgcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207356 True 209 lncRNA 0.25 1 20626655 20626863

Neighbor

gene id symbol gene type direction distance location
clvs2 clvs2,LOC107675233,LOC107675107 coding downstream 10440 20596263 ~ 20616215 (-)
tpd52l1 rnf217,tpd52l1,LOC107727670,LOC107676269,LOC107602193,LOC107675045,LOC107716996,LOC107602194,LOC107676250,LOC107675093,LOC107727644 coding downstream 219593 20373185 ~ 20407062 (-)
hey2 hey2,LOC107717129,LOC107727582,LOC107598074 coding downstream 291742 20330690 ~ 20334913 (-)
pex7 pex7,LOC107727680,LOC107676274 coding downstream 297957 20311424 ~ 20328698 (-)
LOC122324455 slc35d3,LOC107727602,LOC107676236,LOC107675071,LOC107717122 coding downstream 315370 20306639 ~ 20311285 (-)
smpdl3a smpdl3a,LOC107727613 coding upstream 110 20626973 ~ 20632507 (-)
fabp7b fabp7b,fabp7,LOC107675216,LOC107602177,LOC107717149,LOC107675046,LOC102218712 coding upstream 5854 20632717 ~ 20633782 (-)
cpsf2 cpsf2,LOC107704064,LOC107669458 coding upstream 34148 20661011 ~ 20673120 (-)
riox1 zgc:162967,LOC107704066,LOC107669424,LOC107719421,LOC107559126,LOC107548410 coding upstream 48134 20674997 ~ 20680821 (-)
ints9 ints9 coding upstream 80062 20706925 ~ 20718097 (-)
G140328 NA non-coding downstream 339660 20286480 ~ 20286995 (-)
G140315 NA non-coding downstream 358389 20266668 ~ 20268266 (-)
G140304 NA non-coding downstream 458657 20148280 ~ 20167998 (-)
G140265 ehd3,LOC107716590,LOC107675095,LOC107727655,LOC103043599,LOC106520014 non-coding downstream 717008 19905631 ~ 19909647 (-)
G140248 NA non-coding downstream 824987 19800522 ~ 19801668 (-)
G140449 NA non-coding upstream 109725 20736588 ~ 20791701 (-)
LOC122324961 NA non-coding upstream 365658 20992521 ~ 20995513 (-)
G140522 cfap61,LOC107745908,LOC107704077 non-coding upstream 369503 20996366 ~ 20996681 (-)
LOC122325251 NA non-coding upstream 418962 21045825 ~ 21049976 (-)
G140592 NA non-coding upstream 456431 21083294 ~ 21083559 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other downstream 84406 20410629 ~ 20542249 (-)
G140277 cad,LOC107602171 other downstream 563678 20061602 ~ 20062977 (-)
G140227 cad other downstream 567052 20057624 ~ 20059603 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other downstream 1011453 19601532 ~ 19615202 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other downstream 1322687 19298234 ~ 19303968 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other upstream 7433 20634296 ~ 20658380 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other upstream 341325 20968188 ~ 20975755 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other upstream 462541 21089404 ~ 21091008 (-)
G140616 NA other upstream 571847 21198710 ~ 21278741 (-)
lin28b lin28b,LOC107721434,LOC107719403,LOC107697090,LOC107550364 other upstream 856729 21483592 ~ 21505655 (-)

Expression


Co-expression Network