pkib (pkib,LOC107675049,LOC107598105,LOC107602189)


Basic Information

Item Value
gene id pkib
gene name pkib,LOC107675049,LOC107598105,LOC107602189
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 20634296 ~ 20658380 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU207360
GAGAGAAGGAGAATCACGACGAAGATGGTCTCAATACGCGGAATTCCCCTCGCGGATAGCCTCTGTTGGTACTGATTCGGAGTGTTCTCCCGGATAACTCTGCTTCGAGGAGTTGCTTCATGTTCGGAATGATGCTATGAAGACCACCAGAGATGACTGATGTGGAACCTGTTGTCTCTGACTTTGCAGCCACGGGCAGGACTGGCCGGCGGAATGCATTGCCAGATATTCTAGGTTCCACAGCCGGCCCCGGAGCTGCTGACCTGCCTGACAAACTAGCCGAGCTTTCAGTGGGAGATGATGGTGAACCGTGCGGAGAGAGCTCGTCCTCGTCCGACCCACCTAAAGAAACCACAGAGGGGGCAAAGACAGAGGGCTCATAACTCGGCAGTGATCTGACCTCACGAGAGACTCACACATGACCTGCCTCTTCTCTTGCCCCATTGACCAAACAACTGTTACACTCTGCGCTATGCAACATCGAGACCACCCATGACTGGCTTTCAGACGCGGGCCAGCGGGGAAGCAGCTCATTCCTATTACAGGAATTCATCCGAAATTGCGTTTTTCAAATATCAACTATTGTTCATTTCATACCTCGATGACTTTGTcagatttgactttttttttcccccaaagaCTCGCTGTCATGATTTTCCTAACGACCGGCTGTTTCGTGTGTCTTATGAAAACAGATGTGACCTGCtttcccatttaaaaaaaaaaaaaaaaaaaaaaacattttgactttCCATAATAGCATTTTTCTCTGAATGTTGACATGTAGTGgcaaaaatgtctctttttgcacaaaaaaaagtaaatacattccATTTGGTGATGTAAGTAAAGTTTTTTATCTTACGATTTTTGTCTGTCCTTGTATAACGCCGCATCTTCTGTGTTTTGTATTGTTAAGATATGCATTGTTAACATTCTAGCCAGAGGATAAGAAACAGTGCTGAATAACACGAAATATGATATTTTCTTCTTGTAAATACAGAATTGTACATTATATTTGCTAGTTTTGTTTAAAAGCCTTTTGTTTTGTGCGTAACTGCTGTCAGTGTTGCCCTGCGTGAGCTGATATTGGATTGTTAGCTATGAAGTTTTGCTGCAAACATCCGTGTTCATGTCATTCGGACGTCCTCTTAAGTACTTGTCTCAGATATTTCTTTGCTGTTGTCGATGGCAGTGAAAAAATATGACTGCGGAGACTTGCTGttcttcctctctttcatcTTTTCATCATGCTTCCATCAGAAAATGacatctgttttcatttttacctgGCCATAATTCTTGTGTCATTTCGTCTGTTGTAAGCTACATGTAAAATGCCATTAtgctatgtttaaaaatgacaataaatccT
>XM_043218760.1
CGCTCGCGCCGGACTCAGTGTCAGAGAGAAGGAGAATCACGACGAAGATGGTCTCAATACGCGGAATTCCCCTCGCGGATAGCCTCTGTTGGTACTGATTCGGAGTGTTCTCCCGGATAACTCTGCTTCGAGGAGTTGCTTCATGTTCGGAATGATGCTATGAAGACCACCAGAGATGACTGATGTGGAACCTGTTGTCTCTGACTTTGCAGCCACGGGCAGGACTGGCCGGCGGAATGCATTGCCAGATATTCTAGGTTCCACAGCCGGCCCCGGAGCTGCTGACCTGCCTGACAAACTAGCCGAGCTTTCAGTGGGAGATGATGGTGAACCGTGCGGAGAGAGCTCGTCCTCGTCCGACCCACCTAAAGAAACCACAGAGGGGGCAAAGACAGAGGGCTCATAACTCGGCAGTGATCTGACCTCACGAGAGACTCACACATGACCTGCCTCTTCTCTTGCCCCATTGACCAAACAACTGTTACACTCTGCGCTATGCAACATCGAGACCACCCATGACTGGCTTTCAGACGCGGGCCAGCGGGGAAGCAGCTCATTCCTATTACAGGAATTCATCCGAAATTGCGTTTTTCAAATATCAACTATTGTTCATTTCATACCTCGATGACTTTGTcagatttgactttttttttcccccaaagaCTCGCTGTCATGATTTTCCTAACGACCGGCTGTTTCGTGTGTCTTATGAAAACAGATGTGACCTGCtttcccatttaaaaaaaaaaaaaaaaaaaaaaacattttgactttCCATAATAGCATTTTTCTCTGAATGTTGACATGTAGTGgcaaaaatgtctctttttgcacaaaaaaaagtaaatacattccATTTGGTGATGTAAGTAAAGTTTTTTATCTTACGATTTTTGTCTGTCCTTGTATAACGCCGCATCTTCTGTGTTTTGTATTGTTAAGATATGCATTGTTAACATTCTAGCCAGAGGATAAGAAACAGTGCTGAATAACACGAAATATGATATTTTCTTCTTGTAAATACAGAATTGTACATTATATTTGCTAGTTTTGTTTAAAAGCCTTTTGTTTTGTGCGTAACTGCTGTCAGTGTTGCCCTGCGTGAGCTGATATTGGATTGTTAGCTATGAAGTTTTGCTGCAAACATCCGTGTTCATGTCATTCGGACGTCCTCTTAAGTACTTGTCTCAGATATTTCTTTGCTGTTGTCGATGGCAGTGAAAAAATATGACTGCGGAGACTTGCTGttcttcctctctttcatcTTTTCATCATGCTTCCATCAGAAAATGacatctgttttcatttttacctgGCCATAATTCTTGTGTCATTTCGTCTGTTGTAAGCTACATGTAAAATGCCATTAtgctatgtttaaaaatgacaataaatccTGTGCttagttttta

Function

symbol description
pkib Predicted to enable cAMP-dependent protein kinase inhibitor activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within negative regulation of protein kinase activity. Predicted to be active in cytoplasm and nucleus. Orthologous to human PKIB (cAMP-dependent protein kinase inhibitor beta).

NR:

description
cAMP-dependent protein kinase inhibitor alpha-like

GO:

id name namespace
GO:0006469 negative regulation of protein kinase activity biological_process
GO:0004862 cAMP-dependent protein kinase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207360 False 1375 lncRNA 0.42 3 20634310 20658357
XM_043218760.1 True 1412 mRNA 0.43 3 20634296 20658380

Neighbor

gene id symbol gene type direction distance location
fabp7b fabp7b,fabp7,LOC107675216,LOC107602177,LOC107717149,LOC107675046,LOC102218712 coding downstream 514 20632717 ~ 20633782 (-)
smpdl3a smpdl3a,LOC107727613 coding downstream 1789 20626973 ~ 20632507 (-)
clvs2 clvs2,LOC107675233,LOC107675107 coding downstream 18081 20596263 ~ 20616215 (-)
tpd52l1 rnf217,tpd52l1,LOC107727670,LOC107676269,LOC107602193,LOC107675045,LOC107716996,LOC107602194,LOC107676250,LOC107675093,LOC107727644 coding downstream 227234 20373185 ~ 20407062 (-)
hey2 hey2,LOC107717129,LOC107727582,LOC107598074 coding downstream 299383 20330690 ~ 20334913 (-)
cpsf2 cpsf2,LOC107704064,LOC107669458 coding upstream 2631 20661011 ~ 20673120 (-)
riox1 zgc:162967,LOC107704066,LOC107669424,LOC107719421,LOC107559126,LOC107548410 coding upstream 16617 20674997 ~ 20680821 (-)
ints9 ints9 coding upstream 48545 20706925 ~ 20718097 (-)
hmbox1b hmbox1b,LOC107704071,LOC107559131,LOC107669440,LOC107745897 coding upstream 86822 20745202 ~ 20757734 (-)
cd109 LOC107704024,LOC107669414,LOC107548408,LOC107559083,LOC107719417 coding upstream 287257 20945637 ~ 20964922 (-)
G140413 NA non-coding downstream 7433 20626655 ~ 20626863 (-)
G140328 NA non-coding downstream 347301 20286480 ~ 20286995 (-)
G140315 NA non-coding downstream 366030 20266668 ~ 20268266 (-)
G140304 NA non-coding downstream 466298 20148280 ~ 20167998 (-)
G140265 ehd3,LOC107716590,LOC107675095,LOC107727655,LOC103043599,LOC106520014 non-coding downstream 724649 19905631 ~ 19909647 (-)
G140449 NA non-coding upstream 78208 20736588 ~ 20791701 (-)
LOC122324961 NA non-coding upstream 334141 20992521 ~ 20995513 (-)
G140522 cfap61,LOC107745908,LOC107704077 non-coding upstream 337986 20996366 ~ 20996681 (-)
LOC122325251 NA non-coding upstream 387445 21045825 ~ 21049976 (-)
G140592 NA non-coding upstream 424914 21083294 ~ 21083559 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other downstream 92047 20410629 ~ 20542249 (-)
G140277 cad,LOC107602171 other downstream 571319 20061602 ~ 20062977 (-)
G140227 cad other downstream 574693 20057624 ~ 20059603 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other downstream 1019094 19601532 ~ 19615202 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other downstream 1330328 19298234 ~ 19303968 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other upstream 309808 20968188 ~ 20975755 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other upstream 431024 21089404 ~ 21091008 (-)
G140616 NA other upstream 540330 21198710 ~ 21278741 (-)
lin28b lin28b,LOC107721434,LOC107719403,LOC107697090,LOC107550364 other upstream 825212 21483592 ~ 21505655 (-)
LOC122324936 NA other upstream 848864 21507244 ~ 21512483 (-)

Expression


Co-expression Network