LOC122324654 (cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419)


Basic Information

Item Value
gene id LOC122324654
gene name cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 20789876 ~ 20791703 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU207390
aGGAACAGCTAGGCAGATGCTCTCCAGACCAGCAGGCGGAGACGTCTCTCTTCACGCCGCTTCTGTTTTCCTCTCTGTCTTGTGACTCTTCAGTCACCAGCACCGAAAATGTTTCGACACTTTCtgACTCTGCAGCAGGTCTCCAGACGGCAGATCTCCAGCACCGTCCGCAGGCAGCTGGTCAACAAGGTGCCAGACAAACAGAAACTCTTCCAGgAGACCAATGGGATGCCAGTTCATCTGAAGGGAGGAGTCTTTGATGCTGTTCTTTACCGTTCAACTATGGGTCTCACAGTGCTAGGAACTGTATATGTCATATATGAGCTACTGAGGGCAGCCCTCCCTCAGAAGAAGAACTGATGTCGGCTCTTGCCATCCTTTCTGGCCCATTTCTGTGGGAATGTGACGTTATGAGTGTTTcacacagtatatttatttaatttgaaaggtGAAAGGGACCAAAGtggtttgaattaaataaactgtgcc
>XM_043219230.1
AAATTAATGTATCCCAtgtatttcaaaacacttttgaagACTCTGCAGCAGGTCTCCAGACGGCAGATCTCCAGCACCGTCCGCAGGCAGCTGGTCAACAAGGTGCCAGACAAACAGAAACTCTTCCAGgAGACCAATGGGATGCCAGTTCATCTGAAGGGAGGAGTCTTTGATGCTGTTCTTTACCGTTCAACTATGGGTCTCACAGTGCTAGGAACTGTATATGTCATATATGAGCTACTGAGGGCAGCCCTCCCTCAGAAGAAGAACTGATGTCGGCTCTTGCCATCCTTTCTGGCCCATTTCTGTGGGAATGTGACGTTATGAGTGTTTcacacagtatatttatttaatttgaaaggtGAAAGGGACCAAAGtggtttgaattaaataaactgtgcctatcataaacaaacaca
>XM_043219231.1
atcagaagaagaagaagaagaagaagagtaaGGAACAGCTAGGCAGATGCTCTCCAGACCAGCAGGCGGAGACGTCTCTCTTCACGCCGCTTCTGTTTTCCTCTCTGTCTTGTGACTCTTCAGTCACCAGCACCGAAAATGTTTCGACACTTTCtgACTCTGCAGCAGGTCTCCAGACGGCAGATCTCCAGCACCGTCCGCAGGCAGCTGGTCAACAAGGTGCCAGACAAACAGAAACTCTTCCAGgAGACCAATGGGATGCCAGTTCATCTGAAGGGAGGAGTCTTTGATGCTGTTCTTTACCGTTCAACTATGGGTCTCACAGTGCTAGGAACTGTATATGTCATATATGAGCTACTGAGGGCAGCCCTCCCTCAGAAGAAGAACTGATGTCGGCTCTTGCCATCCTTTCTGGCCCATTTCTGTGGGAATGTGACGTTATGAGTGTTTcacacagtatatttatttaatttgaaaggtGAAAGGGACCAAAGtggtttgaattaaataaactgtgcctatcataaacaaacaca

Function

symbol description
cox7a2b Orthologous to several human genes including COX7A2 (cytochrome c oxidase subunit 7A2).

NR:

description
PREDICTED: cytochrome c oxidase subunit 7A2, mitochondrial-like

GO: NA

KEGG:

id description
K02270 COX7A; cytochrome c oxidase subunit 7a

RNA

RNA id representative length rna type GC content exon number start site end site
TU207390 False 489 TUCP 0.48 4 20789906 20791686
XM_043219230.1 False 419 mRNA 0.44 3 20790951 20791703
XM_043219231.1 True 536 mRNA 0.47 4 20789876 20791703

Neighbor

gene id symbol gene type direction distance location
LOC122324653 LOC107745896,LOC107719382,LOC107669439,LOC107704072,LOC107559130,LOC107548431 coding upstream 1524 20761579 ~ 20788352 (+)
kif13bb LOC107704069,LOC107745913,LOC107548409,LOC107669436 coding upstream 44732 20718087 ~ 20745144 (+)
extl3 LOC107745900,LOC107704067,LOC107548434,LOC107559127,LOC107669453 coding upstream 86098 20681088 ~ 20703778 (+)
hddc2 hddc2,LOC107598075,LOC107675094,LOC107676251,LOC107727645,LOC107716823 coding upstream 416811 20370525 ~ 20373065 (+)
esco2 LOC107676264,LOC107727663,LOC107716790,LOC107598071,LOC107675113,LOC107602168 coding upstream 488894 20296392 ~ 20300982 (+)
col12a1b LOC107548430,LOC107704073,LOC107559129,LOC107719381,LOC107669442 coding downstream 2007 20793710 ~ 20860068 (+)
naa20 naa20,LOC106571266 coding downstream 173630 20965333 ~ 20967759 (+)
cfap61 cfap61,LOC107745908,LOC107704077 coding downstream 184074 20975777 ~ 21001918 (+)
insm1a insm1a,LOC107548428,LOC107704078,LOC107719435 coding downstream 210387 21002090 ~ 21004378 (+)
xrn2 xrn2,LOC107704080,LOC107548427,LOC107559134,LOC107669450 coding downstream 263048 21054751 ~ 21079331 (+)
G140406 NA non-coding upstream 156072 20632724 ~ 20633804 (+)
G140381 clvs2,LOC107675107 non-coding upstream 173663 20564340 ~ 20616213 (+)
G140379 NA non-coding upstream 188499 20553100 ~ 20601377 (+)
G140356 NA non-coding upstream 395936 20391605 ~ 20393940 (+)
G140136 hey2,LOC107717129,LOC107598074,LOC107727582,LOC107676222 non-coding upstream 457812 20302947 ~ 20332064 (+)
G140506 crnkl1,LOC107669451,LOC107559132,LOC107704074,LOC107548429 non-coding downstream 180875 20972578 ~ 20973569 (+)
G140523 NA non-coding downstream 235297 21027000 ~ 21027469 (+)
G140673 NA non-coding downstream 638149 21429852 ~ 21430052 (+)
G140686 NA non-coding downstream 642890 21434593 ~ 21434796 (+)
G140708 NA non-coding downstream 690924 21482627 ~ 21483277 (+)
LOC122324291 NA other upstream 115487 20673461 ~ 20674389 (+)
trdn LOC107602167,LOC107727612,LOC107675223 other upstream 197717 20554113 ~ 20592159 (+)
ift172 ift172,LOC107716708,LOC107676240,LOC107727571,LOC107675043,LOC107602169 other upstream 687338 20071974 ~ 20102538 (+)
LOC122325503 galnt14,LOC107675076,LOC107716567,LOC107727639,LOC108429358,LOC107676246 other upstream 913498 19769924 ~ 19876378 (+)
LOC122324993 ift172,LOC107716708,LOC107676240,LOC107727571,LOC107602169,LOC107675043 other upstream 1112184 19651782 ~ 19677692 (+)
G140533 NA other downstream 310065 21101768 ~ 21102510 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other downstream 377072 21168775 ~ 21201962 (+)
G140785 NA other downstream 1052443 21844146 ~ 21844701 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 1680058 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 1715024 22506727 ~ 22517683 (+)

Expression


Co-expression Network