G140615


Basic Information

Item Value
gene id G140615
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21200637 ~ 21201961 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU207612
GCCATCTcagatgtatttaataaattaaaacaaggtacaaaaaaagaaaaagaaaacaaaaaacctaaTGTACATTTGActcctctgtctctgtctctcccttTGCTCTCACTCTGTGATTCGCTAGTAAACAAACACGATAGAACAGCCCTCGTCCACTGATTACGACACATTCTGGGCCACACACATGCTACATGTCGGCAAGCAACTGGGCAGGAAacgaaaaagagagagacacaggcGGTATGtgtttaaaaggatagtttGCCCTATAATTGAAATTTGATGAAAATTTACTCAACTTCAGGACAGGTTTTTTCATAAGAACAGATGGAGAAATATAGCATTATATCACTTACTCACCAATGAatgctctgcagtaaatggGggccattggtgagcaagtgatggaatgatacatttcttcaaatctttTCCTATGAAAAACtgaactcatctacattttaaaTGGCCTGAGAGAGAGTACAACTTCAGCAAATTTGCAGcgattttgggtgaactctacCTTTAATAACTCTTttcaaaagcacattaaatgtttaCTGGTACCACGATGTGTGTTCATGTACCTACTGACATTAAAAGGACTGTTTAACCAAAAAGGAATTTAAGCACCATCTCATCAAAGTAATGCAAATAAACCTGTACAACTTTAATCCTTGTGTAACACAAAGatgaatttctaaaaaaaattgtacaggTTAGGAATGTTATGATGGTAATAAATGATGACTAATAATGAATTTTAGTGCACCGATCTCTCTCTTATTCGTTGTGTAAAGCCCAGTCTCTACTAGTCACCAAATATGCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207612 True 834 lncRNA 0.36 2 21200637 21201961

Neighbor

gene id symbol gene type direction distance location
LOC122324706 NA coding downstream 32578 21154385 ~ 21168059 (-)
nkx2.4b nkx2.4b,LOC107704036,LOC107548417,LOC107669430,LOC107745907,LOC107580186 coding downstream 117923 21079804 ~ 21082714 (-)
cd109 LOC107704024,LOC107669414,LOC107548408,LOC107559083,LOC107719417 coding downstream 235715 20945637 ~ 20964922 (-)
hmbox1b hmbox1b,LOC107704071,LOC107559131,LOC107669440,LOC107745897 coding downstream 442903 20745202 ~ 20757734 (-)
ints9 ints9 coding downstream 482540 20706925 ~ 20718097 (-)
tram2 tram2,LOC107593275,LOC107721446 coding upstream 48787 21250748 ~ 21256606 (-)
xkr5a xkr5,LOC107721445,LOC107593274,LOC107691011,LOC107719374 coding upstream 57572 21259533 ~ 21264967 (-)
prdm1c NA coding upstream 63454 21265415 ~ 21274238 (-)
hadhaa hadhaa,hadha,LOC107593272,LOC107721447,LOC107691000,LOC107697212 coding upstream 103749 21305710 ~ 21315327 (-)
rab10 rab10,LOC107593269,LOC107697207,LOC102798439 coding upstream 314818 21516779 ~ 21530446 (-)
G140592 NA non-coding downstream 117078 21083294 ~ 21083559 (-)
LOC122325251 NA non-coding downstream 150661 21045825 ~ 21049976 (-)
G140522 cfap61,LOC107745908,LOC107704077 non-coding downstream 203956 20996366 ~ 20996681 (-)
LOC122324961 NA non-coding downstream 205124 20992521 ~ 20995513 (-)
G140449 NA non-coding downstream 408936 20736588 ~ 20791701 (-)
G140635 NA non-coding upstream 45029 21246990 ~ 21247465 (-)
G140637 NA non-coding upstream 55429 21257390 ~ 21259521 (-)
G140683 NA non-coding upstream 229845 21431806 ~ 21432094 (-)
G140687 NA non-coding upstream 232983 21434944 ~ 21435469 (-)
G140688 NA non-coding upstream 233836 21435797 ~ 21436058 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other downstream 109629 21089404 ~ 21091008 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other downstream 224882 20968188 ~ 20975755 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other downstream 542257 20634296 ~ 20658380 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other downstream 658388 20410629 ~ 20542249 (-)
G140277 cad,LOC107602171 other downstream 1137660 20061602 ~ 20062977 (-)
lin28b lin28b,LOC107721434,LOC107719403,LOC107697090,LOC107550364 other upstream 281631 21483592 ~ 21505655 (-)
LOC122324936 NA other upstream 305283 21507244 ~ 21512483 (-)
batf batf,LOC107697118 other upstream 530583 21732544 ~ 21741077 (-)
G140883 NA other upstream 639152 21841113 ~ 21841468 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other upstream 640471 21842432 ~ 21844633 (-)

Expression


Co-expression Network