G140616


Basic Information

Item Value
gene id G140616
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21198710 ~ 21278741 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU207613
tatatatatatatatatatatatataatcaatcataataatcatttcatttcaaaaaacGTCCACAACATTTTGGCAGAATCGAGCGTGAGGGGTTAAACAGACAGAGATATAGAGGATAGATATAAAGCCACAGAGAAAAATCAGTCTGTATTGGTCCCTCTCTCTGTTAGCAGCACACGGACTCATCACCCCACAGTTTACTAGAttattatgtgcatttatatatattttaatatatatgtgtatatatatgctttttatttcagtatctccaaaataaaaataaaaaaacatttaactaaCACTATTTCTTTGTTCAAACGGATGCAAATTATCACAAGGAAAACAGCCCAGGAGCCACGGAAGATCGATCGAACATGGGAGAATCAAAGAACGGTTTCCAGCGAACATGCCGTGAGATGCGGGGGGGGTGGGGCGGAGATGTCGTCTGTTCAGATCGCCCTACAGAGGCCCCAAAATCCAATGAGACAGTggttgaaagagagagagagtgcgagAAGGAACGAGTTTGGAGGAAGATCCTGACTCTCGGATGGTCTGTTCTGACACGTGTCATTCGCGTCGCACTGAGGGCTTCAGGGAGtacttttttgtactttttgggTTTCCTCACACTCTGTGTCCGTATGAGCACCTGTTGGCTGAACGTGTTTTTCTGCTCGTCAGAGACGCGTGAGGATGGGAAGCCCGGCGAGCGCAGAGCTTCTTTGAGCCACACGGTCAGCAGAGCGAAGCAATGCTTGTTCAGACAGAAGAGCACCTCCGCAAACTGATCCATCAGACTGCGGGACGACTGACCGCCGA
>TU207614
cacgttttaaatgcaaaacagaagCGTTTTCATTAACTGCTCACACCCCACTGTGTATATTGGGTGTATATGAAGATGACATGTAACACTGCAGCCCAATGGGCGCGCGCTCACACGTGCACTCTCTCTTTGATCGCGTCGGTCGCGGAAGTTCCCGCGAAACAATCTGTTACAATGTCTCACATATTTAATCGGGAGTGAAATAACCCCGCGCATATGTCGTCTGTTCAGATCGCCCTACAGAGGCCCCAAAATCCAATGAGACAGTggttgaaagagagagagagtgcgagAAGGAACGAGTTTGGAGGAAGATCCTGACTCTCGGATGGTCTGTTCTGACACGTGTCATTCGCGTCGCACTGAGGGCTTCAGGGAGtacttttttgtactttttgggTTTCCTCACACTCTGTGTCCGTATGAGTGGTGGCTCAGTAGTCCGCTGCGTATTCGGTTCCGTGAAGGCCACGGCACACCAGGGTGAACTCCTTCACAATGTCTTTCACTCGCCGCTTGTTCACTCGCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207613 True 827 TUCP 0.44 3 21198710 21278741
TU207614 False 531 lncRNA 0.50 2 21199816 21203969

Neighbor

gene id symbol gene type direction distance location
LOC122324706 NA coding downstream 30651 21154385 ~ 21168059 (-)
nkx2.4b nkx2.4b,LOC107704036,LOC107548417,LOC107669430,LOC107745907,LOC107580186 coding downstream 115996 21079804 ~ 21082714 (-)
cd109 LOC107704024,LOC107669414,LOC107548408,LOC107559083,LOC107719417 coding downstream 233788 20945637 ~ 20964922 (-)
hmbox1b hmbox1b,LOC107704071,LOC107559131,LOC107669440,LOC107745897 coding downstream 440976 20745202 ~ 20757734 (-)
ints9 ints9 coding downstream 480613 20706925 ~ 20718097 (-)
hadhaa hadhaa,hadha,LOC107593272,LOC107721447,LOC107691000,LOC107697212 coding upstream 26969 21305710 ~ 21315327 (-)
rab10 rab10,LOC107593269,LOC107697207,LOC102798439 coding upstream 238038 21516779 ~ 21530446 (-)
gnpat2 si:ch73-21k16.5,LOC107593264,LOC107697202,LOC107719367,LOC107550407,LOC107685372 coding upstream 351529 21630270 ~ 21639546 (-)
lpin1b si:ch73-21k16.1,LOC107708326,LOC107593263,LOC107685350 coding upstream 361588 21640329 ~ 21655564 (-)
fez2b si:ch211-57i17.1,LOC107708323,LOC107685354,LOC107719364,LOC107550411 coding upstream 411677 21690418 ~ 21697694 (-)
G140592 NA non-coding downstream 115151 21083294 ~ 21083559 (-)
LOC122325251 NA non-coding downstream 148734 21045825 ~ 21049976 (-)
G140522 cfap61,LOC107745908,LOC107704077 non-coding downstream 202029 20996366 ~ 20996681 (-)
LOC122324961 NA non-coding downstream 203197 20992521 ~ 20995513 (-)
G140449 NA non-coding downstream 407009 20736588 ~ 20791701 (-)
G140683 NA non-coding upstream 153065 21431806 ~ 21432094 (-)
G140687 NA non-coding upstream 156203 21434944 ~ 21435469 (-)
G140688 NA non-coding upstream 157056 21435797 ~ 21436058 (-)
LOC122324488 NA non-coding upstream 158951 21437692 ~ 21477858 (-)
G140808 NA non-coding upstream 203877 21482618 ~ 21483300 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other downstream 107702 21089404 ~ 21091008 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other downstream 222955 20968188 ~ 20975755 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other downstream 540330 20634296 ~ 20658380 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other downstream 656461 20410629 ~ 20542249 (-)
G140277 cad,LOC107602171 other downstream 1135733 20061602 ~ 20062977 (-)
lin28b lin28b,LOC107721434,LOC107719403,LOC107697090,LOC107550364 other upstream 204851 21483592 ~ 21505655 (-)
LOC122324936 NA other upstream 228503 21507244 ~ 21512483 (-)
batf batf,LOC107697118 other upstream 453803 21732544 ~ 21741077 (-)
G140883 NA other upstream 562372 21841113 ~ 21841468 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other upstream 563691 21842432 ~ 21844633 (-)

Expression


Co-expression Network