G140687


Basic Information

Item Value
gene id G140687
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21434944 ~ 21435469 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU207710
CCCAAACATGTCATGCAACTTGCGTGACTGATGTTGACAAGACTCTTCGttgatattttatgttttatttattttcggcGGCCCCAAAGATTGCCATTTCtatttttgattttgctttTCAAGCCCCTTTCTGCGAGTGCTTAATCACAACGGTGATTTTCCCCCAGTGGGACTGAGACGTTGACTAGAAATGtttaagcgtgtgtgtgttttataatggCTGATTGTTGTAAATGCAGGATCGTATCAAGCACTTTCTGACATGAGCAACTGAGTTTACGTGctggagagacacagagagaggaagtgagagaaagaggaaaatgaggaaAGGATGGACTGAGAGAGAGATGCATGTAGGAGCAAGTAAGCTGCCCCGAGGGAGCATGACTGCAGCTGTCAATCAGAGTTCAGACAGAGACTGACAGAGAATGACCTGAATGTGcaaatcacacgcacacacacataaagaaaaGGGGGGGAAGACAACATCACATTCCAGTTAACTGAAGAATGGCATTCTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207710 True 526 lncRNA 0.44 1 21434944 21435469

Neighbor

gene id symbol gene type direction distance location
hadhaa hadhaa,hadha,LOC107593272,LOC107721447,LOC107691000,LOC107697212 coding downstream 119617 21305710 ~ 21315327 (-)
prdm1c NA coding downstream 160706 21265415 ~ 21274238 (-)
xkr5a xkr5,LOC107721445,LOC107593274,LOC107691011,LOC107719374 coding downstream 169977 21259533 ~ 21264967 (-)
tram2 tram2,LOC107593275,LOC107721446 coding downstream 178338 21250748 ~ 21256606 (-)
LOC122324706 NA coding downstream 266885 21154385 ~ 21168059 (-)
rab10 rab10,LOC107593269,LOC107697207,LOC102798439 coding upstream 81310 21516779 ~ 21530446 (-)
gnpat2 si:ch73-21k16.5,LOC107593264,LOC107697202,LOC107719367,LOC107550407,LOC107685372 coding upstream 194801 21630270 ~ 21639546 (-)
lpin1b si:ch73-21k16.1,LOC107708326,LOC107593263,LOC107685350 coding upstream 204860 21640329 ~ 21655564 (-)
fez2b si:ch211-57i17.1,LOC107708323,LOC107685354,LOC107719364,LOC107550411 coding upstream 254949 21690418 ~ 21697694 (-)
wdr26b wdr26b,LOC107697199,LOC107708322,LOC107685355 coding upstream 263937 21699406 ~ 21713062 (-)
G140683 NA non-coding downstream 2850 21431806 ~ 21432094 (-)
G140637 NA non-coding downstream 175423 21257390 ~ 21259521 (-)
G140635 NA non-coding downstream 187479 21246990 ~ 21247465 (-)
G140615 NA non-coding downstream 232983 21200637 ~ 21201961 (-)
G140592 NA non-coding downstream 351385 21083294 ~ 21083559 (-)
G140688 NA non-coding upstream 328 21435797 ~ 21436058 (-)
LOC122324488 NA non-coding upstream 2223 21437692 ~ 21477858 (-)
G140808 NA non-coding upstream 47149 21482618 ~ 21483300 (-)
G140817 NA non-coding upstream 113615 21549084 ~ 21552231 (-)
G140826 NA non-coding upstream 132164 21567633 ~ 21568360 (-)
G140616 NA other downstream 156203 21198710 ~ 21278741 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other downstream 343936 21089404 ~ 21091008 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other downstream 459189 20968188 ~ 20975755 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other downstream 776564 20634296 ~ 20658380 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other downstream 892695 20410629 ~ 20542249 (-)
lin28b lin28b,LOC107721434,LOC107719403,LOC107697090,LOC107550364 other upstream 48123 21483592 ~ 21505655 (-)
LOC122324936 NA other upstream 71775 21507244 ~ 21512483 (-)
batf batf,LOC107697118 other upstream 297075 21732544 ~ 21741077 (-)
G140883 NA other upstream 405644 21841113 ~ 21841468 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other upstream 406963 21842432 ~ 21844633 (-)

Expression


Co-expression Network