G140786


Basic Information

Item Value
gene id G140786
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21844833 ~ 21845453 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU207856
gatatgatcactatttatacacctaacagaccactcagatcactaggatcaagtcagttagaaaaaccaaaggttcacaccaaacaaggagaatctgcttttagttattatgctgctcgcatctggaaccagcttcctgaagagatcagatgtgctgaaacattagtcacttttaaatccagactcaaaactcatctgtttagatgtgcatttacagaatgagcactgtgctgcgtcctaactgtttgcttcttttattttaaactgttttaaatcaatctctttttgctttaaattcaatttatcttaaatcagtgtttttattttattttaatttcttttattgttatttaaatcttgtaattattttatttcctctcttgtaaagcactttgaattaccattgtgtatgaaatgtgctatataaataaacttgccttgccttgccttgccttgctcTGAAtgagttaaatattttaaaaattattaagtGACATCATTATTTAAACACAACACGCAAGATTGATACAACATTTGAACAAATATATAAGGTTTAGCCAATTTATcatagtattaaaataatgactgGAGCAAGGCCACATCTTAATCTTAGTAGTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207856 True 621 lncRNA 0.31 1 21844833 21845453

Neighbor

gene id symbol gene type direction distance location
bmf2 LOC107550420,LOC107593255,LOC107719427,LOC107685367 coding upstream 20714 21817203 ~ 21824119 (+)
rmdn3 rmdn3,LOC107593256,LOC107685363,LOC107719355,LOC107697192 coding upstream 50690 21787959 ~ 21794143 (+)
eif2b2 eif2b2,LOC107719358,LOC107685362,LOC107697194,LOC107742715 coding upstream 65588 21774884 ~ 21779245 (+)
tmed10 tmed10,LOC107697197,LOC107685358,LOC107593259,LOC107550417 coding upstream 70464 21771292 ~ 21774369 (+)
fosab LOC107697196,LOC107719360,LOC107685356,LOC107550415,LOC107742716 coding upstream 76231 21766414 ~ 21768602 (+)
taar10 LOC107697082,LOC107550377,LOC107719389 coding downstream 44698 21890151 ~ 21891194 (+)
taar10a taar10a,taar10b,taar10d,taar10c,LOC107719440,LOC107697108,LOC107550390,LOC107719439,LOC107697105,LOC107697107 coding downstream 51498 21896951 ~ 21897961 (+)
LOC122325159 taar10b,taar10c,taar10d,taar10a,LOC107719439,LOC107550391,LOC107697107,LOC107697105,LOC107550394 coding downstream 54319 21899772 ~ 21900828 (+)
LOC122325217 taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440 coding downstream 64948 21910401 ~ 21911411 (+)
LOC122325154 taar10b,taar10d,taar10a,taar10c,LOC107697105,LOC107550394,LOC107719440 coding downstream 69190 21914643 ~ 21915653 (+)
G140784 NA non-coding upstream 4368 21840223 ~ 21840465 (+)
LOC122325564 NA non-coding upstream 106086 21735966 ~ 21738747 (+)
G140747 NA non-coding upstream 109161 21732575 ~ 21735672 (+)
G140698 NA non-coding upstream 145575 21698421 ~ 21699258 (+)
G140721 NA non-coding upstream 207639 21636509 ~ 21637194 (+)
G140788 NA non-coding downstream 1361 21846814 ~ 21847021 (+)
G140792 NA non-coding downstream 4309 21849762 ~ 21850135 (+)
G140794 si:dkey-246e3.4,taar14f,LOC107550386,LOC107719426,LOC107550373,LOC107697083,LOC107719394 non-coding downstream 5409 21850862 ~ 21853121 (+)
G140900 NA non-coding downstream 63521 21908974 ~ 21909333 (+)
G140905 NA non-coding downstream 88531 21933984 ~ 21978548 (+)
G140785 NA other upstream 132 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 642871 21168775 ~ 21201962 (+)
G140533 NA other upstream 742323 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 1053130 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 1170444 20673461 ~ 20674389 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 626308 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 661274 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 898959 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 997352 22842805 ~ 22860327 (+)
pln NA other downstream 1498262 23343715 ~ 23351655 (+)

Expression


Co-expression Network