G141324


Basic Information

Item Value
gene id G141324
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22888520 ~ 22894015 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU208609
AGGGGCCCCACATCTGTTAGTAATCTTAAATAGAGGGAATATAATTCACCGTTCGACAGGTTTAAGATTGAAGCCATTTAATTTGTACAGTGAACACTATGCACaacaggagagaaaaaaaagggaacatTCAAAAGTGGtttcatccatttatttatgcCATTTTCAAAGAGCTCACAGGTACACCCTGCAAACATTAATGCAAGGCTTGGGCAGTGTTATTCATGCAGGGTGCAGATGGGATGGCTTTGAGGTCAGGAATCAGCCCCGTGTTGATCGATATGTTGTT

Function

GO:

id name namespace
GO:0003006 developmental process involved in reproduction biological_process
GO:0046332 SMAD binding molecular_function
GO:0070412 R-SMAD binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208609 True 289 lncRNA 0.41 2 22888520 22894015

Neighbor

gene id symbol gene type direction distance location
snx9b snx9b,LOC107678839,LOC107726735,LOC107697144,LOC107743295,LOC107549668 coding downstream 11375 22859476 ~ 22877145 (-)
pomcb NA coding downstream 42967 22840896 ~ 22845553 (-)
si:dkey-206f10.1 si:dkey-206f10.1,LOC107603098,LOC107743294,LOC107549698 coding downstream 85553 22793237 ~ 22802967 (-)
parp1 parp1,LOC107678834,LOC107697162 coding downstream 96578 22777121 ~ 22791942 (-)
lin9 lin9,LOC107726751,LOC107678835,LOC107697095,LOC107743312 coding downstream 112088 22769919 ~ 22776432 (-)
afdna afdn,LOC107697133,LOC107678828 coding upstream 23649 22917664 ~ 23019738 (-)
si:ch211-140l13.3 tcp10,LOC107603066,LOC107697070,LOC107580373 coding upstream 149085 23043100 ~ 23054740 (-)
slc22a2 slc22a2,LOC107678851,LOC107603093,LOC107727631,LOC107549708,LOC107697145,LOC107743318 coding upstream 168258 23062273 ~ 23067373 (-)
igf2r igf2r,LOC107727636,LOC107603065,LOC107678818,LOC107743319 coding upstream 174143 23068158 ~ 23099346 (-)
tdrd15 LOC107727677,LOC107678846,LOC107603064,LOC107743302,LOC107697132 coding upstream 206336 23100351 ~ 23109361 (-)
G141307 NA non-coding downstream 57099 22830914 ~ 22831421 (-)
G141283 NA non-coding downstream 147593 22739641 ~ 22740927 (-)
G141255 NA non-coding downstream 226279 22660615 ~ 22662241 (-)
G141083 NA non-coding downstream 346826 22541463 ~ 22541694 (-)
G141082 NA non-coding downstream 347370 22540688 ~ 22541150 (-)
G141331 LOC107726750,LOC107678830 non-coding upstream 15242 22909257 ~ 22915952 (-)
G141343 NA non-coding upstream 161033 23055048 ~ 23056056 (-)
G141370 NA non-coding upstream 301158 23195173 ~ 23196196 (-)
G141404 NA non-coding upstream 676981 23570996 ~ 23571790 (-)
G141477 NA non-coding upstream 877062 23771077 ~ 23771457 (-)
G140972 NA other downstream 775476 22112602 ~ 22113044 (-)
LOC122325102 taar14e,si:dkey-246e3.4,LOC107550386,LOC107719394,LOC107550373,LOC107593252,LOC107719391,LOC107719426,LOC107697114 other downstream 1041603 21845214 ~ 21846917 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other downstream 1043887 21842432 ~ 21844633 (-)
G140883 NA other downstream 1047052 21841113 ~ 21841468 (-)
batf batf,LOC107697118 other downstream 1147443 21732544 ~ 21741077 (-)
mcm9 mcm9,LOC107678857,LOC107549683,LOC107743310,LOC107697136,LOC107727573,LOC107603056 other upstream 490556 23384571 ~ 23401391 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other upstream 891737 23785752 ~ 23823050 (-)
G141502 NA other upstream 1110672 24004687 ~ 24006665 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other upstream 1360378 24254393 ~ 24517743 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other upstream 1630054 24524069 ~ 24532363 (-)

Expression


Co-expression Network