G141464


Basic Information

Item Value
gene id G141464
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 23947616 ~ 23948827 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU208797
CTGTACCAGTTTGTCAGCGTCATCATGATATACAGGGAGGCCAAAAAGAGCATGAAGTGGAAGAAAGAGTAGCTGTAGGTGACTCCATCCTTCTCGTTGTCAACGGCGCGGTTGGAGTCGTCGCCCACTTCGAAGTTCTCTGGAGCGGGGCCGTCCTCGATGAGGGCAGACTCGTCGCTGGTGAGGGTCAGTTTGTTCACTTGGGCGTTGCTGGAGTTGCGGatgctgaagaaataaaaaaaagcgcTACGTTGAACAACAGCTGCAACAAACAGCCCGTGCGTTTTTAGCAACCGCAAACTCTCTTACCTGGAGTACAGCACACACATCAGGAACAAGATCAATCCCACAATGCCCTGGGCATCCCACCATTGAACGACGCGGTCCTGGCCGGCAGGGGTGGTGCTGTTGAGGCCGATGATGCCGAGCAAGCTGGGGTTGCATCTGCGGTCTTGGGGCGAAAGTACAGCGTTGTTTTACACAGATTTTTATGAACCGCAAAACCGCTTTAAAACAATTCTCTCTCAGTCCTCACCGGGCTCGTTGGTCATGGCAGACCAGGTCAGATACATCGTGTACAGAGTAACAATGGAGGACTGCAAGAGACCAGACCTGGGCTGAGACTCTGGATTTTAGGTAAGATGGACATGACGGACGCACCAACGCACAGCAGCATGTTGATGCTGATGAAGACTTTGTTCTCAGTGCAGCCATCAGAGTGAGTGTAATACACGTAGAACAAGACCAGAGACACCAGTGACAGAGCGTAGTTGACGGCCGTCGCAGACAGAAGAGCTGTGGATggtaataaacagaaaattacAATTCCATCAGTCTTCTTTACGACTGTATGCACTGTAAGATGCATCTAAACCAAACAAGAACAACTTGGATGCGTTCTACTCACGACATCATTTACGTTTAAGCTATTCGCTACCTTTTAAAATTCGGAAAGATTTTCTGGAAATAAAATTCTACTGACGAGGACGAAACAAGTTCTGTTCTTCCtaatcatctaaaaaaaaaaaaaatcctttaaaataaagcgtccagaaaatttaaaaaaaaaaaaaattttgtgttcagcattgataataaataaatgacatttta

Function

GO:

id name namespace
GO:0019787 ubiquitin-like protein transferase activity molecular_function
GO:0004842 ubiquitin-protein transferase activity molecular_function

KEGG:

id description
ko04140 Autophagy - animal
ko04138 Autophagy - yeast
ko04136 Autophagy - other

RNA

RNA id representative length rna type GC content exon number start site end site
TU208797 True 1113 lncRNA 0.46 2 23947616 23948827

Neighbor

gene id symbol gene type direction distance location
hsf2 LOC107727660,LOC107602187,LOC107675230,LOC107716856,LOC107598084,LOC107675083 coding upstream 1662 23940664 ~ 23945954 (+)
gja1b LOC107675226,LOC107602186,LOC107716890,LOC107598086,LOC107697125 coding upstream 100113 23844087 ~ 23847503 (+)
gja13.1 cx32.2,LOC107727577,LOC107675217,LOC107602176,LOC107697126,LOC107717163,LOC107598087 coding upstream 104126 23840772 ~ 23843490 (+)
gja12.1 cx28.9,LOC107717177,LOC107717184,LOC107598108,LOC107697093,LOC107602175,LOC107727580,LOC107675219 coding upstream 111763 23832318 ~ 23835853 (+)
gja13.2 cx32.3,LOC107727579,LOC107675218,LOC107697094,LOC107717194,LOC107598109,LOC107580737 coding upstream 116233 23829232 ~ 23831383 (+)
slc24a4b slc24a4b,slc24a4,LOC107719386,LOC107559124,LOC107669463,LOC107704063,LOC107548412 coding downstream 22253 23971080 ~ 24004048 (+)
fut8b fut8b,fut8a,fut8,LOC107730784,LOC107726710,LOC107559123,LOC107669464 coding downstream 173030 24121857 ~ 24348875 (+)
LOC122324313 hsp90ab1,LOC107704054,LOC107669433,LOC107559118,LOC107568216 coding downstream 313662 24262489 ~ 24268335 (+)
gphnb gphnb,gphn,LOC107669455,LOC106571666,LOC107730782 coding downstream 431184 24380011 ~ 24453951 (+)
LOC122324917 LOC107732493,LOC107704058 coding downstream 520851 24469678 ~ 24477818 (+)
G141439 NA non-coding upstream 164896 23782508 ~ 23782720 (+)
G141436 NA non-coding upstream 176190 23771095 ~ 23771426 (+)
G141403 NA non-coding upstream 376162 23571095 ~ 23571454 (+)
G141216 NA non-coding upstream 538792 23388492 ~ 23408824 (+)
G141207 NA non-coding upstream 615250 23330191 ~ 23332366 (+)
G141465 serinc1,LOC104938560,LOC102778905 non-coding downstream 434 23949261 ~ 24007460 (+)
G141469 NA non-coding downstream 6067 23954894 ~ 23966589 (+)
G141466 NA non-coding downstream 55860 24004687 ~ 24086637 (+)
LOC122324430 NA non-coding downstream 73307 24022134 ~ 24032657 (+)
G141523 NA non-coding downstream 475213 24424040 ~ 24424479 (+)
pln NA other upstream 595961 23343715 ~ 23351655 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other upstream 1087289 22842805 ~ 22860327 (+)
matn3a matn3a other upstream 1193455 22744412 ~ 22754161 (+)
fkbp1b fkbp1b other upstream 1429933 22506727 ~ 22517683 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other upstream 1470842 22471761 ~ 22476774 (+)
G141475 NA other downstream 124044 24072871 ~ 24074423 (+)
G141524 NA other downstream 491416 24440243 ~ 24493381 (+)
pals1b mpp5b,LOC107568213,LOC107704059 other downstream 508163 24456990 ~ 24482661 (+)
LOC122325234 tsta3,zgc:153776,LOC107672947,LOC107655839,LOC107559101,LOC107728120 other downstream 1020053 24968880 ~ 24994837 (+)
irf4l LOC107572583,LOC107739192,LOC107671083,LOC107557006,LOC107661363,LOC107728105,LOC108443244 other downstream 1215154 25163981 ~ 25168421 (+)

Expression


Co-expression Network