G141477


Basic Information

Item Value
gene id G141477
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 23771077 ~ 23771457 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU208815
GGCATTGACCTGGTCTCTAATCTGAGCTGCTGTTAACCTGTGATTTCTGAGGCTGGTGACTCGGATGAACTTATCCTCCGCAGCAGAGGTGACTCTTGGTCTTCCTTTCCTGGGGCGGTCCGCATGTGAGCCAGTTTCTTTGATGCGCTTGATGGTTTTTGTGACTGCACTTGGGGACACTTTCAAAGTTTTCCCAAATTTTCAGACTGACTGACCTTCATTTCTTAAAGTAATGATGGCCACTCGTTTCTCTTTACTTAGCTGCTTTTTTCTTGCCATAATACAAATTCTAAAAGTCTATTCAGTGGGACTATCAGCTGTGTATCCACCTGACTTCTGCACAACGCAACTGATGGTCCCAACCCCATTTATAAGGCAAGA

Function

GO:

id name namespace
GO:0016591 RNA polymerase II, holoenzyme cellular_component
GO:0005669 transcription factor TFIID complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208815 True 381 lncRNA 0.45 1 23771077 23771457

Neighbor

gene id symbol gene type direction distance location
man1a1 man1a1,LOC107727625,LOC107697158 coding downstream 46869 23628261 ~ 23724208 (-)
fam184ab fam184a,LOC107678849,LOC107697135 coding downstream 262533 23403070 ~ 23508544 (-)
cep85l cep85l,LOC107727619,LOC107603087 coding downstream 390449 23321174 ~ 23380628 (-)
gopc gopc,LOC107727658,LOC107743304,LOC107697149,LOC107678854 coding downstream 560641 23197531 ~ 23210436 (-)
tdrd15 LOC107727677,LOC107678846,LOC107603064,LOC107743302,LOC107697132 coding downstream 661716 23100351 ~ 23109361 (-)
gja12.2 cx28.1,LOC107727590,LOC107675221,LOC107717169,LOC107598107,LOC107697092 coding upstream 65028 23836485 ~ 23840023 (-)
serinc1 serinc1,LOC107675227,LOC107727646,LOC107675084,LOC107602188,LOC107598085 coding upstream 174718 23946175 ~ 23952434 (-)
tmem121ab tmem121b,LOC107548420,LOC107704034,LOC107719437,LOC107669431,LOC107559097,LOC108257619 coding upstream 242693 24014150 ~ 24058837 (-)
atp6v1d atp6v1d,LOC107568214,LOC107559096,LOC107669460,LOC107726702 coding upstream 710615 24482072 ~ 24485488 (-)
rbm25b rbm25,rbm25b,LOC107704053,LOC107669447,LOC107568207 coding upstream 721295 24492752 ~ 24510530 (-)
G141404 NA non-coding downstream 199287 23570996 ~ 23571790 (-)
G141370 NA non-coding downstream 574881 23195173 ~ 23196196 (-)
G141343 NA non-coding downstream 715021 23055048 ~ 23056056 (-)
G141331 LOC107726750,LOC107678830 non-coding downstream 855125 22909257 ~ 22915952 (-)
G141324 NA non-coding downstream 877062 22888520 ~ 22894015 (-)
G141478 NA non-coding upstream 60 23771517 ~ 23772116 (-)
G141479 NA non-coding upstream 3460 23774917 ~ 23781508 (-)
G141481 NA non-coding upstream 11872 23783329 ~ 23783811 (-)
LOC122324337 NA non-coding upstream 94389 23865846 ~ 23868883 (-)
G141493 NA non-coding upstream 98720 23870177 ~ 23875598 (-)
mcm9 mcm9,LOC107678857,LOC107549683,LOC107743310,LOC107697136,LOC107727573,LOC107603056 other downstream 369686 23384571 ~ 23401391 (-)
G140972 NA other downstream 1658033 22112602 ~ 22113044 (-)
LOC122325102 taar14e,si:dkey-246e3.4,LOC107550386,LOC107719394,LOC107550373,LOC107593252,LOC107719391,LOC107719426,LOC107697114 other downstream 1924160 21845214 ~ 21846917 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other downstream 1926444 21842432 ~ 21844633 (-)
G140883 NA other downstream 1929609 21841113 ~ 21841468 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other upstream 14295 23785752 ~ 23823050 (-)
G141502 NA other upstream 233230 24004687 ~ 24006665 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other upstream 482936 24254393 ~ 24517743 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other upstream 752612 24524069 ~ 24532363 (-)
G141651 NA other upstream 799956 24571413 ~ 24647421 (-)

Expression


Co-expression Network