G141539


Basic Information

Item Value
gene id G141539
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24522506 ~ 24523847 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU208915
GCGGTCATGAAAAGttcataatgcaataataattttttgcttACGTAATTGCCATGAAAATGTCAcaatcccccccaaaaaagtaattattcatTAGATTAATCTGGCAATGCTCCACTAATCATAATTTACCAACACTGATGATTTGTATCACTAATTCAAAAGTAAAGATAAAACCACAGCATGTGAACGTTAGCACTGATTAGAGTTAAAGAATAATTCTGCAAGCTGCAGAAGGACATAAATGCTGGACGAAAAGAGATTTCACCTTAATATTTTGGTCTACCTCAAAGACGTCCCACAGCAAAAGGCATCCCTTCTCACGTTTAACTGTGCCGTATTACTGCGAACACGAGACATCAATCCATCCCGCTGCTTTAAACACcacaaaagaaattcataaaactGTAATAGAAGGCAGATTATTAttgcacatgcaaaaaaacattaacataaaaaaaagaaaagctactAAAATGATTATCAGCTTCCCTAAGAACCTtcaatatagtaaaataaactaaaaaaaaaaaaaaaaaagttttattaatatacattaaaacagaCGTGATTAGTATTGCATAAATGAACTGAAGCTGAAGGTCTTGTTCTACCaaatactaaaaatgaacactaaaaaatgaaaaactggaTTGCCGGCTTTTCTCGTCTTATCGCGTCTGCGCATATTTTAAGCGACAGAATTTACAGAAACATTCACAGAAACTGGAACTTCCCTTTCGGGCTCGTACTAAACccgtgacatttttttttttagcggaGAGTGAATCTCGCCAAACCGGTCAGAGCATGCTTCACCCCGAAGTcaaaaaggggaaaaagacAAGACAATAAAGCCTATTTTTTGAAAAActgcagtgcaaaaaaaataaataactaacaCGTTGCTGAAATTAATTACCTTTGTGAGGTACGCCAATattgcagttgttttaaaagaaacggGTCTTATTTCTTTACTcaacatgtatataatttttctttatgcCCGAGAAGGACTGAGGTGAATTCTGTATTTTAGACACAGTTATCGGCTTGTTTGCCACGTAGCGAACACTTTTAATGCTCGTACGCGTTTCTACGCGAGGCAAACAGGCACCGGAGGTTCACGGTTTGATATGGCAGAAACTCAGAAGAGAAAGAGCAGGGTGCACTGGCCTGACCGGGGAGTTACGGGCATCTATGAGGACGTTCATGTTTATGGCCGTGTTTGCTGCGATTGTTTATGACACGAGAATCTCACAAAGCCGAGTCCAGAAGTCTAGGTCATATTTCATACAAAATccaaaatatgtgtgtttttattaacggtaatactata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208915 True 1342 lncRNA 0.37 1 24522506 24523847

Neighbor

gene id symbol gene type direction distance location
hsp90ab1 hsp90ab1,LOC107704054,LOC107669433,LOC107559118 coding upstream 4774 24511899 ~ 24517732 (+)
eif2s1b eif2s1b,eif2s1,LOC107704056,LOC107732494,LOC107559120 coding upstream 31132 24485743 ~ 24491374 (+)
LOC122324917 LOC107732493,LOC107704058 coding upstream 44688 24469678 ~ 24477818 (+)
gphnb gphnb,gphn,LOC107669455,LOC106571666,LOC107730782 coding upstream 68555 24380011 ~ 24453951 (+)
LOC122324313 hsp90ab1,LOC107704054,LOC107669433,LOC107559118,LOC107568216 coding upstream 254171 24262489 ~ 24268335 (+)
tmem151ba tmem151ba,LOC107704033,LOC107732502,LOC107568228,LOC107726705,LOC107559094 coding downstream 23240 24547087 ~ 24557704 (+)
thbd NA coding downstream 85171 24609018 ~ 24610945 (+)
LOC122325457 LOC107712572,LOC107559111 coding downstream 87222 24611069 ~ 24614897 (+)
LOC122325456 LOC107669443,LOC107559110,LOC107712571,LOC107736022 coding downstream 91716 24615563 ~ 24619884 (+)
aida aida,LOC107704043,LOC107710640,LOC107568227 coding downstream 168054 24691901 ~ 24698132 (+)
G141538 NA non-coding upstream 284 24521973 ~ 24522222 (+)
G141536 NA non-coding upstream 3015 24519173 ~ 24519491 (+)
G141535 NA non-coding upstream 4139 24518086 ~ 24518367 (+)
G141534 NA non-coding upstream 18041 24500091 ~ 24504465 (+)
G141523 NA non-coding upstream 98027 24424040 ~ 24424479 (+)
G141526 NA non-coding downstream 4054 24527901 ~ 24532599 (+)
G141525 LOC107732488,LOC107704051,LOC107559117,LOC107568226,LOC107669434,LOC107726706 non-coding downstream 13418 24537265 ~ 24543897 (+)
G141553 NA non-coding downstream 47569 24571416 ~ 24647428 (+)
G141554 NA non-coding downstream 49695 24573542 ~ 24575677 (+)
G141580 NA non-coding downstream 137927 24661774 ~ 24683500 (+)
G141524 NA other upstream 29125 24440243 ~ 24493381 (+)
pals1b mpp5b,LOC107568213,LOC107704059 other upstream 39845 24456990 ~ 24482661 (+)
G141475 NA other upstream 448083 24072871 ~ 24074423 (+)
pln NA other upstream 1170851 23343715 ~ 23351655 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other upstream 1662179 22842805 ~ 22860327 (+)
LOC122325234 tsta3,zgc:153776,LOC107672947,LOC107655839,LOC107559101,LOC107728120 other downstream 445033 24968880 ~ 24994837 (+)
irf4l LOC107572583,LOC107739192,LOC107671083,LOC107557006,LOC107661363,LOC107728105,LOC108443244 other downstream 640134 25163981 ~ 25168421 (+)
G141775 NA other downstream 698120 25221967 ~ 25223109 (+)
fig4a fig4,fig4b,LOC107667833 other downstream 727051 25250898 ~ 25311427 (+)
LOC122324336 LOC107564333,LOC107557900,LOC107659797,LOC107712192 other downstream 1252628 25776475 ~ 25828915 (+)

Expression


Co-expression Network