G141580


Basic Information

Item Value
gene id G141580
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24661774 ~ 24683500 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU208992
tatatatatatatatatatatatatatatatatatatatatatatgtgtgtgtgtgtatatatatatatatacacacacacaaaagcagacACATGTAGCTTATACTTAAAAAACCTACATGTATAGAATTATATGAaactaatttatattatataaaatttaaaattttcttaaatatatacatacacacaaatctAAACACATATAGTGAacatgaatgcaattaatcgcaaataattgtttgacagcactaatatgaatgtgtgtatgtgtgtgtgtgtgtgtgtgtgtttatatattataaatgcatacgGTCACGAAACAGCAATAATGTGGCAATGTATGCTTAATTGTcttgaaaataatgttataatgcaataaatgtatttttccccCTTTACACATTTTTGTCACATATATTGGGGtgagatttgtattttattcgGAAATTCAACTAGTTTAGATGCAGTTTAACATTTGCACTAATCAATGGATTATTTAAATAAGAGTTAATTGTCTGAacatcgtttaaaaaaaaacaataaggaCGAATTTAGAGATCTATATAAGTTATTCTCCAATCAATGGACCCGATAAACCTTAAAAATCTCACCAGGGTCATTTCGCTACAGAGAAACGATTGGGTCTGGGTTACTAGGATTAACTGTTGGTCATATTTTAGTCGTACAGTCCTTCATTAGAACATCTGTCGCTTGCAGACGAAACACCTTAAACAGAATCCGAGCACGAGACAGACGCCACTGTTATATCACTATGTTATATTGGTATATATTTGATCGGGGGAGAGAATAACACGAGAGAAGACTCCAGACTCCTCCAGATCTCCTGGACATCATGCTTCACCTGTCTGCCGCCGCTTGAGCCGGACTTTAAGAGACGACGCAGCCCGTGTCCTTCTGAGGCTTCAGATCCGGCTCCTTCACCGGCTTGATCTCCTCGTCGTGCTTCGCTTTTGCCTGGAGTCAATATATTGTTTGATGTAAACATTGTCATGAGAGTGTCCatatcatatatacacacacatataattgATAGTTCACCAATTTTGGGAAACGATGCATAAAGAGCAGGGGGGGAGTGAATACTTTTGACCAGGCTGAaattgtgtactttttttttttgttggttcaCGCAAATACTTGTAAGTCTTCATACTTGTACGTTTCCCAGAAGGCAAAATAGGTACAATTTACCCAGATcttcaattcagttcaaaagttttcacacccCCTGGCTCTTAACGCTTCGTGTCGACGTTTGAACCTTTTGTAA

Function

GO:

id name namespace
GO:0009247 glycolipid biosynthetic process biological_process
GO:0006661 phosphatidylinositol biosynthetic process biological_process
GO:0016255 attachment of GPI anchor to protein biological_process
GO:0006505 GPI anchor metabolic process biological_process
GO:0006506 GPI anchor biosynthetic process biological_process
GO:0008654 phospholipid biosynthetic process biological_process
GO:0046467 membrane lipid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208992 True 1294 lncRNA 0.35 2 24661774 24683500

Neighbor

gene id symbol gene type direction distance location
LOC122325456 LOC107669443,LOC107559110,LOC107712571,LOC107736022 coding upstream 41890 24615563 ~ 24619884 (+)
LOC122325457 LOC107712572,LOC107559111 coding upstream 46877 24611069 ~ 24614897 (+)
thbd NA coding upstream 50829 24609018 ~ 24610945 (+)
tmem151ba tmem151ba,LOC107704033,LOC107732502,LOC107568228,LOC107726705,LOC107559094 coding upstream 104070 24547087 ~ 24557704 (+)
hsp90ab1 hsp90ab1,LOC107704054,LOC107669433,LOC107559118 coding upstream 144042 24511899 ~ 24517732 (+)
aida aida,LOC107704043,LOC107710640,LOC107568227 coding downstream 8401 24691901 ~ 24698132 (+)
taf1a NA coding downstream 29075 24712575 ~ 24729795 (+)
dusp10 dusp10,LOC107739190,LOC107568217,LOC107710641,LOC107559105,LOC107704023 coding downstream 49649 24733149 ~ 24750237 (+)
arhgap39 arhgap39,LOC107672944,LOC107559071 coding downstream 184991 24868491 ~ 24915286 (+)
LOC122325235 tsta3,LOC107559101,LOC107672948,LOC107672947 coding downstream 264793 24948293 ~ 24962830 (+)
G141553 NA non-coding upstream 14346 24571416 ~ 24647428 (+)
G141554 NA non-coding upstream 86097 24573542 ~ 24575677 (+)
G141525 LOC107732488,LOC107704051,LOC107559117,LOC107568226,LOC107669434,LOC107726706 non-coding upstream 117877 24537265 ~ 24543897 (+)
G141526 NA non-coding upstream 129175 24527901 ~ 24532599 (+)
G141539 NA non-coding upstream 137927 24522506 ~ 24523847 (+)
G141589 NA non-coding downstream 4841 24688341 ~ 24690294 (+)
G141592 NA non-coding downstream 23097 24706597 ~ 24707816 (+)
G141596 NA non-coding downstream 46783 24730283 ~ 24730843 (+)
LOC122324292 NA non-coding downstream 72767 24756267 ~ 24796370 (+)
G141604 NA non-coding downstream 97911 24781411 ~ 24781624 (+)
G141524 NA other upstream 168393 24440243 ~ 24493381 (+)
pals1b mpp5b,LOC107568213,LOC107704059 other upstream 179113 24456990 ~ 24482661 (+)
G141475 NA other upstream 587351 24072871 ~ 24074423 (+)
pln NA other upstream 1310119 23343715 ~ 23351655 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other upstream 1801447 22842805 ~ 22860327 (+)
LOC122325234 tsta3,zgc:153776,LOC107672947,LOC107655839,LOC107559101,LOC107728120 other downstream 285380 24968880 ~ 24994837 (+)
irf4l LOC107572583,LOC107739192,LOC107671083,LOC107557006,LOC107661363,LOC107728105,LOC108443244 other downstream 480481 25163981 ~ 25168421 (+)
G141775 NA other downstream 538467 25221967 ~ 25223109 (+)
fig4a fig4,fig4b,LOC107667833 other downstream 567398 25250898 ~ 25311427 (+)
LOC122324336 LOC107564333,LOC107557900,LOC107659797,LOC107712192 other downstream 1092975 25776475 ~ 25828915 (+)

Expression


Co-expression Network