rhpn1 (rhpn1,LOC107704026,LOC107669421)



Basic Information


Item Value
gene id rhpn1
gene name rhpn1,LOC107704026,LOC107669421
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24838652 ~ 24851779 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU209178
CGCCTTGCGAAGCAACAAGTGGATTTAGCGATTCTGAGCGAACTTGATTCTTTGACGGAGAGAAACCAACGCGTCTGGTCGCGCGTGCGGCCAAAGCCGTTAAGTAAGCGGGAAAAGTAAGCGGAAGGCAGCCGTTCGAGCGGAGTTCGCGTTCCGTTGGCGTTTAACGGATTTACGGTTGCGTTTGCGCAGTTCGATGACGTGCGCGCGCTGCTGTGAGCGCAGGTGTTGTTGTAGGTGTGCAGGACGGTAATAAATCTGATTTATGATGTGCGACTCTGGGTCAGATGAGGATATATCCCCTGAGGACGGAGGATCGACGGAGTCCGTCCGCAAGggatGTGATCCTCTCGTCTCAACCCAGCGCAGCAAACTGCAGCAGCGGAGAGCTAAACTCAACCAGAAGATCAACCGAGAGCTTCGCCTGCGGAGCGGAGCTGAAAACCTTTACAGGGCCAGCAGTAATCAGAAGGTGAAAGAGACTGTTGCGTTAGAACTGAGTTTCGTGAACTCGAACCTTCAGCTTCTCAAAGAAGAACTGGAGGAACTGAACAGCAGTATGAACGTCTACCAGACCGAGAGTTTCAGCGTTCCCATGATTCCACTTGGACTGAAAGAGACTAAAGAGACGGACATGACCGTTCCTCTTCAGGATTTCATCAGTGAGCATTACAGTGAGGACGCGTCTCTGTACCTGAACGAGATCCGGGAATTTATGGAACTAAGACAGGCCATGAGAACGCCCAGCAGGAGTGAGTCGGGACAGGAGCTGCTGATGGAATATTATAACCAGCTCTATTTCCTGGATCAGCGCTTCTTCTCACCGCACAGAAGTCTGGGAATTCATTTTCACTGGTG
>XM_043220390.1
GATCAGCTGTGGCTCGTGCGCCTTGCGAAGCAACAAGTGGATTTAGCGATTCTGAGCGAACTTGATTCTTTGACGGAGAGAAACCAACGCGTCTGGTCGCGCGTGCGGCCAAAGCCGTTAAGTAAGCGGGAAAAGTAAGCGGAAGGCAGCCGTTCGAGCGGAGTTCGCGTTCCGTTGGCGTTTAACGGATTTACGGTTGCGTTTGCGCAGTTCGATGACGTGCGCGCGCTGCTGTGAGCGCAGGTGTTGTTGTAGGTGTGCAGGACGGTAATAAATCTGATTTATGATGTGCGACTCTGGGTCAGATGAGGATATATCCCCTGAGGACGGAGGATCGACGGAGTCCGTCCGCAAGggatGTGATCCTCTCGTCTCAACCCAGCGCAGCAAACTGCAGCAGCGGAGAGCTAAACTCAACCAGAAGATCAACCGAGAGCTTCGCCTGCGGAGCGGAGCTGAAAACCTTTACAGGGCCAGCAGTAATCAGAAGGTGAAAGAGACTGTTGCGTTAGAACTGAGTTTCGTGAACTCGAACCTTCAGCTTCTCAAAGAAGAACTGGAGGAACTGAACAGCAGTATGAACGTCTACCAGACCGAGAGTTTCAGCGTTCCCATGATTCCACTTGGACTGAAAGAGACTAAAGAGACGGACATGACCGTTCCTCTTCAGGATTTCATCAGTGAGCATTACAGTGAGGACGCGTCTCTGTACCTGAACGAGATCCGGGAATTTATGGAACTAAGACAGGCCATGAGAACGCCCAGCAGGAGTGAGTCGGGACAGGAGCTGCTGATGGAATATTATAACCAGCTCTATTTCCTGGATCAGCGCTTCTTCTCACCGCACAGAAGTCTGGGAATTCATTTTCACTGGTGAGATGCAAATGAGTTAATGAATTAATCTTAGTCAAAGTCAGAGCTTCTGATTATTTTCATCAGGTTAAAACGCAACGGCACGATCCAGAAGCGCGATTAAAacgaaagtaaataaatgttcaacATCGGAGCACTTTATACTCAGATCGGGGCCAGACAGGATCGCTCGACACTGACGGGCATTCAGAGCGCCATCGATGCTTTCCAGAGAGCAGCGGGTGCGTTTCTCTACCTGCAGGAGAATTTCTCTCACGCGCCGAGTCTGGATATGAGCGGCCCTGCTCTTAGCATGCTGGTCCGTCTCATGGTAGCTCAGgttcaggagtgtgtgtgtgagatggtCATACTCAGCGTGCAGGACGACGACCTGAACGTGCTTCTGCAAGCCGCCCAGGAGGCAGCGagggtgtcaGACGTGTATTCTCTGGTTCTCCAGGCGATGTCGGTGCCGTTACTGAAGGACTACGTTCCCTTCTCCTGGATCTCTATGGTTCAGGTCAAAACGCATCATTTCAGAGCGCTGGCTCACTACTACACCGCTGTGGCGCTGTGTGACTGTTCAGCAGTTCTGTCtgatgaagatgacgatgaagGTCGAGAGATTAAAGCTCTCGTACAGGTTCACACCAGACGGCCGGAAAAACTCAATCTTCGTGATCCCGAGGACAAGCGGAGACTCGGTAAAGCTCACCTGCGGAAAGCCATCATACGTCACGAGGAGGCCCTCCGTCTTCACGGCGTGTGCAAGATGCTTCGCAAGATGGACATCCTGCAGGAAGTCCTGTCACACGCTCACGCGCGCTCGCTGGAGAAATACTCCGACATCGATCAGGAGGATGATTTCTGCGAGGTCGCGGAGGCTCCGGAGATCCAGTCTCACACACAGCAGAAGCCTGACATTAAAGCTCCAGATTTCAGCAGCGTCAGAGTGACTGATATCTTCCACCGACTGgggcCCCTGTCCGTGTTTGCCGCTCGGAACCGCTGGGTGCGCCGCCATGTGTGTCTGGTTCGAGGAGAGGCGGGGCTCGGGCTCACGCTTCGAGGCGATTCGCCGGTTCTGGTCGCCGGGGTGTTGCCGGGGGGACGCGCTGCGGAGGCGGGGCTCCGCGAGGGCGATTACCTGGTGGCTGTGAACGGCGCGGACCGCAGGTGGGCAGAACACGCCGAGGTCGTTCACGCTCTGAAGAGCTGCACCGAGAGAGGACTGGAGGTGGACGTCATCACTCTACAGTCACACGAGGCCGAGAGGAGGATGAATCTCTCACCCGGCGGGGAGAAGGAGTGTCAGTCGGGCAGCCAGAGGAGAGCCGGCCGGGAATACGAGCGGGGGTCCTCGTCTCTGTGGAACTGGAGCTGGAGGAGCGCTGGAGTCACCAAGAGACTCGGGAGCACCTTCAGCCTCTCCTTCGGGAACGCCAGAGAGAGCGAGTCCATGTTCTGACGCAGAACAAAAGCAGTTTTACCCACTACAGCACGGTTATCACATAAAGTTATAGTTTTTAAACTAGCTGCTTTAGAGGCATGCATTTCATCACGTAAAGTTACCCTGACGGGGTTTTATTAGCACTATGCTGTAACGGGCCTTATTCTAACTGTGTCTCGCAGCAGCTCCAGAAGGTATTGAAGGAATCGGTAGAGCGGATGTATGCGCCATTACTACGGGACAGGACTTTTATTAAGTTAAGTGAGAATAGAGAACGATCAGATGCAGATACATGCGCGTGTACGTTCGTTCCACTTTAGGAAATACAGAAACCATGGCTAACGTAAAAACGGCCCGTGCGGTCGCCCTAGGAACTAGTCGCCCAAGAATGAACATTTGCTGGAAATGTGCTCACCCCcaggccattcaagatgtagaCGTAGAGTTGGTTTCTTCCGTCGGGTTTGGAGGAACGTGCAAAACTGTGGCGAAtgggatgggtgccgtcaagaactgcggcgaatgggtgccgtcaagaactgcggcgaatgggtgccgtcaagaACTGCGGCGTATGGGTGCCGTCAAGAACTGCGgagaatgggtgccgtcagaaatgCAGGCGTATGGGTGCCGTCAAGAActgcggcgaatgggtgccgtcaagaactgcggcgaatgggtgccgtcaagaACTGCGGCGTATGGGTGCCGTCAAGAACTGCGGCGTATGGGTGCCGTCAAGAACTGCGGCGTATGGGTGCCGTCAAGAACTGCGGCGTATGGGTGCCGTCAAGAACTGCGGCGTATGGGTGCCATCAAGAACTGCGGCGTATGGGTGCCGTCAAGAACTGCGGCGTATGGGTGCCATCAAGAACTGCGgagaatgggtgccgtcagaaatgCAGGCGTATGGGTGCCGTGAAGAActgcggcgaatgggtgccgtcaagaactgcggcgaatgggtgccgtcaagaactgcggcgaatgggtgccgtcagaactgCGGAGAATGGGTGCAAACTATAGAATACTTACCAACTATATCAGCTTATTGAGACAAAATCCATATACGGGCCAGtgttttaacaatatatttgacAGTATATTTTTCTTGCATGGTTTTATTGCCTGTTAAACTACATAATGCAATATGCCTATATACTTGTGAACATAACTTATAAGTACATTATTATAACAAACACCTGCAGAGGGCGCCAACGGCCTGGAGCCCGTCCCTTCACAGCGTGATACATAAATGACCTTTAAATCTATTCCATTTTAACATTCGGCCTcatgcaaacttttattttgcgtCCTCCCGTGGTTTAGAAATGATTACACGAGTTATTTACCTTCAGCCGTTTCGATTCAGAATTAAAAGAATTAGTTTCTGGCTTCCAGTGGATTAACGGTTTTCAACAAACGCTCGTTTTTTAggcgaactgttcctttaagaatgcactttttttgcacagaaaagTCTATTAGGTCTGTTTATTAGTTGTTGTCAGAAGCGATTCGTTTTCCAGCTGCGCTCTGCCTTGATTTAAAGCCGCACGTCCCGCGCAGGCCTCTTTATCGTGACAAATAAATCAAGTGCTTCTTTCCCCATTTAAACACCATTTACAGCCCTAACAGTGCCTGCTGATGCACACAATCTCACATTATCTCTTTTTGTGCGAGCGTGCTCATCACTCGGGGGCGAGATCGGGCCCCGTTTCGCGCTAATCCTAATAATGATGTTTAAAGAAAAGCGCGTTCGGGAGTCGGTGGCATTCAAGCCTCGAACCAGAAGCTCTCGAGATGACATTTATAAGGAAGCGTTCTAACAGCTGACTCTCGTCGCGCTGGGGATTGCAGGAATGAATATGCAGTAAACAGTGATGAAATATGGGTTATTGCTGCCAAATGTGTTTGGATCCTACACCGAGCGGCTCCCCGGACGCGCGGCTGCGCTGGGAACCGAGGCGGCTCCGATCTGGACAGCTTCAAGTCTATTAGAGCAGACAAGGCCGATTAAAGGAGCGCGTCTGAGAACGGAGCTGGaggaaaagtgtttttttagtaGAGGCTTCTTCAGGCCGCTAGAGAGCAGCAGCAGTCAGAGCAAGACGCGCCTAATTAAAGCCCTGCTCTGAAAACACAAATTTTCATGCAAacgcttttttttctgtggagaCGAAATCCTTAGACATAATGCAattagacctttttttttttttttgctttgacgAAGTCGTGATTTTCTATTAAACTAATTTTGAACTGGaa

Function


symbol description
rhpn1 Predicted to act upstream of or within signal transduction. Orthologous to human RHPN1 (rhophilin Rho GTPase binding protein 1).

NR:

description
rhophilin-1-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU209178 False 858 TUCP 0.52 6 24847665 24851761
XM_043220390.1 True 4579 mRNA 0.51 15 24838652 24851779
Loading

Neighbor


gene id symbol gene type direction distance location
hlx1 hlx,hlx1,LOC107704027,LOC107567024,LOC107739182,LOC107728099 coding downstream 5662 24829849 ~ 24832990 (-)
mia3 mia3,LOC107739181,LOC107568205 coding downstream 117546 24699172 ~ 24721106 (-)
brox brox,LOC107710643,LOC107732498,LOC107704042,LOC107568230 coding downstream 147563 24682627 ~ 24691089 (-)
LOC122324924 LOC107704029 coding downstream 156178 24678486 ~ 24682474 (-)
LOC122324925 LOC107559109,LOC107669446,LOC100330838,LOC107704031,LOC107568211,LOC107732492 coding downstream 161028 24674210 ~ 24677624 (-)
naprt naprt,LOC107704039,LOC107669423 coding upstream 690 24852469 ~ 24861840 (-)
c20h8orf82 LOC107669429,LOC107728113,LOC107704038,LOC107567028,LOC107739166 coding upstream 13680 24865459 ~ 24867178 (-)
tbc1d7 tbc1d7,LOC108443239,LOC108260306 coding upstream 224709 25076488 ~ 25085331 (-)
wu:fi04e12 LOC107739175,LOC107672942,LOC107567016,LOC107661358,LOC107728115 coding upstream 234391 25086170 ~ 25102714 (-)
LOC122325515 LOC107739175,LOC107661358,LOC107728115,LOC107672942,LOC107567016 coding upstream 252459 25104238 ~ 25116679 (-)
G141684 NA non-coding downstream 17226 24821200 ~ 24821426 (-)
G141683 NA non-coding downstream 25496 24812825 ~ 24813156 (-)
G141682 NA non-coding downstream 40019 24794855 ~ 24798633 (-)
G141679 NA non-coding downstream 49748 24788672 ~ 24788904 (-)
G141676 NA non-coding downstream 61789 24776615 ~ 24776863 (-)
G141889 NA non-coding upstream 25969 24877748 ~ 24916483 (-)
G141899 NA non-coding upstream 84892 24936671 ~ 24947770 (-)
G141908 NA non-coding upstream 109475 24961254 ~ 24965553 (-)
G141911 NA non-coding upstream 166915 25018694 ~ 25022931 (-)
G141931 NA non-coding upstream 187913 25039692 ~ 25042258 (-)
G141651 NA other downstream 191231 24571413 ~ 24647421 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 306289 24524069 ~ 24532363 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other downstream 320909 24254393 ~ 24517743 (-)
G141502 NA other downstream 831987 24004687 ~ 24006665 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other downstream 1015602 23785752 ~ 23823050 (-)
mettl24 LOC107738893 other upstream 443065 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other upstream 474729 25326508 ~ 25377416 (-)
G142058 NA other upstream 796713 25648492 ~ 25650093 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other upstream 895888 25747667 ~ 25754008 (-)
LOC122324466 samd15 other upstream 1199050 26050829 ~ 26054469 (-)

Expression


rhpn1(rhpn1,LOC107704026,LOC107669421) Expression in all Baseline Samples

Bar chart with 10 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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rhpn1(rhpn1,LOC107704026,LOC107669421) Expression in each Bioproject

Bar chart with 2 bars.
rhpn1(rhpn1,LOC107704026,LOC107669421) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
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Co-expression Network