Item | Value |
---|---|
gene id | G141920 |
gene name | phactr1,LOC107739173,LOC107655832,LOC107557022 |
gene type | non-coding |
species | tiger barb (Puntius tetrazona) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_056718.1 |
NCBI id | CM032087.1 |
chromosome length | 27616869 |
location | 25054807 ~ 25059921 (-) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
symbol | description |
---|---|
phactr1 | Predicted to enable actin binding activity; protein phosphatase 1 binding activity; and protein phosphatase inhibitor activity. Acts upstream of or within vasculature development. Predicted to be located in cytoplasm; nucleus; and synapse. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 70. Orthologous to human PHACTR1 (phosphatase and actin regulator 1). |
description |
---|
PREDICTED: fragile X mental retardation syndrome-related protein 1-like isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU209575 | True | 513 | lncRNA | 0.61 | 2 | 25054807 | 25059921 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
c20h8orf82 | LOC107669429,LOC107728113,LOC107704038,LOC107567028,LOC107739166 | coding | downstream | 187629 | 24865459 ~ 24867178 (-) |
naprt | naprt,LOC107704039,LOC107669423 | coding | downstream | 192967 | 24852469 ~ 24861840 (-) |
hlx1 | hlx,hlx1,LOC107704027,LOC107567024,LOC107739182,LOC107728099 | coding | downstream | 221817 | 24829849 ~ 24832990 (-) |
mia3 | mia3,LOC107739181,LOC107568205 | coding | downstream | 333701 | 24699172 ~ 24721106 (-) |
brox | brox,LOC107710643,LOC107732498,LOC107704042,LOC107568230 | coding | downstream | 363718 | 24682627 ~ 24691089 (-) |
tbc1d7 | tbc1d7,LOC108443239,LOC108260306 | coding | upstream | 16567 | 25076488 ~ 25085331 (-) |
wu:fi04e12 | LOC107739175,LOC107672942,LOC107567016,LOC107661358,LOC107728115 | coding | upstream | 26249 | 25086170 ~ 25102714 (-) |
LOC122325515 | LOC107739175,LOC107661358,LOC107728115,LOC107672942,LOC107567016 | coding | upstream | 44317 | 25104238 ~ 25116679 (-) |
psmg4 | LOC107671085,LOC107661364,LOC107739191,LOC107728114,LOC107572584 | coding | upstream | 88221 | 25148142 ~ 25150522 (-) |
bphl | bphl | coding | upstream | 91291 | 25151212 ~ 25153120 (-) |
G141936 | NA | non-coding | downstream | 2900 | 25046771 ~ 25051907 (-) |
G141931 | NA | non-coding | downstream | 12549 | 25039692 ~ 25042258 (-) |
G141911 | NA | non-coding | downstream | 31876 | 25018694 ~ 25022931 (-) |
G141908 | NA | non-coding | downstream | 89254 | 24961254 ~ 24965553 (-) |
G141899 | NA | non-coding | downstream | 107037 | 24936671 ~ 24947770 (-) |
G141941 | slc22a23,LOC107739176,LOC107572580,LOC107578994 | non-coding | upstream | 6814 | 25066735 ~ 25131192 (-) |
G141943 | NA | non-coding | upstream | 9061 | 25068982 ~ 25119763 (-) |
G141951 | NA | non-coding | upstream | 105317 | 25165238 ~ 25168599 (-) |
G141966 | NA | non-coding | upstream | 158608 | 25218529 ~ 25305703 (-) |
G141972 | NA | non-coding | upstream | 217223 | 25277144 ~ 25325809 (-) |
rhpn1 | rhpn1,LOC107704026,LOC107669421 | other | downstream | 203028 | 24838652 ~ 24851779 (-) |
G141651 | NA | other | downstream | 407386 | 24571413 ~ 24647421 (-) |
slc35b2 | slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 | other | downstream | 522444 | 24524069 ~ 24532363 (-) |
LOC122324315 | rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 | other | downstream | 537064 | 24254393 ~ 24517743 (-) |
G141502 | NA | other | downstream | 1048142 | 24004687 ~ 24006665 (-) |
mettl24 | LOC107738893 | other | upstream | 234923 | 25294844 ~ 25408775 (-) |
wasf1 | wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 | other | upstream | 266587 | 25326508 ~ 25377416 (-) |
G142058 | NA | other | upstream | 588571 | 25648492 ~ 25650093 (-) |
LOC122324601 | slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 | other | upstream | 687746 | 25747667 ~ 25754008 (-) |
LOC122324466 | samd15 | other | upstream | 990908 | 26050829 ~ 26054469 (-) |