G141972


Basic Information

Item Value
gene id G141972
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25277144 ~ 25325809 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU209671
acacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgaaaaccATTGTAAAACATTGTGGCCTTTTTCTTTTCCGAGGTCTATAAATTGTAACTTACTGCGTTTCTCGATccatgaacaaaataaaatagtgatTACCGTTTGCCAAACCGTGAGAGCGGACTCTGTGAGTGAAGAGATGGAGGAAGTGAGCGCTCGTcgtctgtgtgtctgtttctgtcGGGACTGAACGCCCGTTTCTCTTTCTTAGGCCTTATGGTTTGTATAAATGTTGATGAGTTGAATGTATCGTGCTGTTACTACTTTTGCCTGCATTTCTCCAGCATTCGCTGTTTCTATGTTCCAAACgggggaagaagaaaaaaaaagagattcagAAACAAAgattaaacatgatttaaaatactgtataccGTGTAACGTATGTAACTGTTTACTGTAACAGTTTgcttgaattaataaaaactaatgtttAAGGTTaaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209671 True 544 lncRNA 0.38 2 25277144 25325809

Neighbor

gene id symbol gene type direction distance location
gata4 gata4,LOC107671084,LOC107739180,LOC107557004,LOC107661355,LOC107728131,LOC107564601 coding downstream 54064 25212806 ~ 25223080 (-)
fdft1 fdft1,LOC107661354,LOC107671088 coding downstream 65548 25202241 ~ 25211596 (-)
ctsbb ctsbb,LOC107557005,LOC107661356 coding downstream 78213 25190559 ~ 25198931 (-)
LOC122325043 LOC107671087,LOC107728123,LOC107661362,LOC107556999 coding downstream 87624 25169118 ~ 25189520 (-)
bphl bphl coding downstream 124024 25151212 ~ 25153120 (-)
LOC122325309 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 coding upstream 144973 25470782 ~ 25561241 (-)
ppp2r5cb ppp2r5cb,LOC107704375,LOC108411434,LOC103025090,LOC108257814,LOC103369946 coding upstream 250220 25576029 ~ 25596184 (-)
hsp90aa1.2 LOC100701982,LOC102800076,LOC107378075,LOC103155532,LOC103457915,LOC105909576 coding upstream 271304 25597113 ~ 25609145 (-)
hsp90aa1.1 hsp90aa1.1,LOC107704377,LOC107557012,LOC107564585,LOC103024454,LOC106533044 coding upstream 283507 25609316 ~ 25615276 (-)
LOC122325306 mgat2,LOC107728126,LOC107564584,LOC107730605,LOC107704380 coding upstream 300843 25626652 ~ 25630935 (-)
G141951 NA non-coding downstream 108545 25165238 ~ 25168599 (-)
G141941 slc22a23,LOC107739176,LOC107572580,LOC107578994 non-coding downstream 145952 25066735 ~ 25131192 (-)
G141943 NA non-coding downstream 157381 25068982 ~ 25119763 (-)
G141920 phactr1,LOC107739173,LOC107655832,LOC107557022 non-coding downstream 217223 25054807 ~ 25059921 (-)
G141936 NA non-coding downstream 225237 25046771 ~ 25051907 (-)
G141998 NA non-coding upstream 73742 25399551 ~ 25400241 (-)
G142006 NA non-coding upstream 99809 25425618 ~ 25426323 (-)
G142009 NA non-coding upstream 104990 25430799 ~ 25431686 (-)
G142026 NA non-coding upstream 131600 25457409 ~ 25459232 (-)
G142015 NA non-coding upstream 148397 25474206 ~ 25596812 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other downstream 425365 24838652 ~ 24851779 (-)
G141651 NA other downstream 629723 24571413 ~ 24647421 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 744781 24524069 ~ 24532363 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other downstream 759401 24254393 ~ 24517743 (-)
G141502 NA other downstream 1270479 24004687 ~ 24006665 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other upstream 699 25326508 ~ 25377416 (-)
G142058 NA other upstream 322683 25648492 ~ 25650093 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other upstream 421858 25747667 ~ 25754008 (-)
LOC122324466 samd15 other upstream 725020 26050829 ~ 26054469 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other upstream 762606 26088415 ~ 26096971 (-)

Expression


Co-expression Network