G142015


Basic Information

Item Value
gene id G142015
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25474206 ~ 25596812 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU209743
tatatattaataatttttttattttttgtattttactgtacaaatgtacttttcaatttaaatacgCATTTTAATATTCCTAAAAACACTGACCcataattttgaaaatggaCCACAAGACACAGAAACTacgtaaacataaaaaaaacgcttttaaaaaattacaaaatgtattaaaaaagcTGTTTGGCTGTGTTtaacttaaatgtttaaaaacacacgttttaagtttaaataaaaaacatgtgaAACGATATAAAATGTACAGCCTTGTAAAACTCTTACTAAActaatgttttgtcatttttaaaaacaaaatgcttgcAATCATACTTCATAATAAATCGTATAATTGTAGAAACAAaagatatatatatgtgtgtgtgtgtgtgtgtatataaatatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209743 True 407 lncRNA 0.23 3 25474206 25596812

Neighbor

gene id symbol gene type direction distance location
gata4 gata4,LOC107671084,LOC107739180,LOC107557004,LOC107661355,LOC107728131,LOC107564601 coding downstream 251126 25212806 ~ 25223080 (-)
fdft1 fdft1,LOC107661354,LOC107671088 coding downstream 262610 25202241 ~ 25211596 (-)
ctsbb ctsbb,LOC107557005,LOC107661356 coding downstream 275275 25190559 ~ 25198931 (-)
LOC122325043 LOC107671087,LOC107728123,LOC107661362,LOC107556999 coding downstream 284686 25169118 ~ 25189520 (-)
bphl bphl coding downstream 321086 25151212 ~ 25153120 (-)
hsp90aa1.2 LOC100701982,LOC102800076,LOC107378075,LOC103155532,LOC103457915,LOC105909576 coding upstream 301 25597113 ~ 25609145 (-)
hsp90aa1.1 hsp90aa1.1,LOC107704377,LOC107557012,LOC107564585,LOC103024454,LOC106533044 coding upstream 12504 25609316 ~ 25615276 (-)
LOC122325306 mgat2,LOC107728126,LOC107564584,LOC107730605,LOC107704380 coding upstream 29840 25626652 ~ 25630935 (-)
trnas-gcu_30 NA coding upstream 37048 25633860 ~ 25633943 (-)
LOC122325519 plcb1,LOC107663155,LOC108423552,LOC103033987,LOC107678738,LOC107728323 coding upstream 157688 25754500 ~ 25776163 (-)
G142026 NA non-coding downstream 14974 25457409 ~ 25459232 (-)
G142009 NA non-coding downstream 42520 25430799 ~ 25431686 (-)
G142006 NA non-coding downstream 47883 25425618 ~ 25426323 (-)
G141998 NA non-coding downstream 73965 25399551 ~ 25400241 (-)
G141974 NA non-coding downstream 139162 25279727 ~ 25335044 (-)
G142201 plcb4,LOC107557901,LOC106608066,LOC107659823,LOC107564330 non-coding upstream 241560 25838372 ~ 25865079 (-)
G142260 NA non-coding upstream 409457 26006269 ~ 26010388 (-)
G142261 NA non-coding upstream 413838 26010650 ~ 26012248 (-)
G142245 NA non-coding upstream 420559 26017371 ~ 26033198 (-)
G142242 NA non-coding upstream 421907 26018719 ~ 26055565 (-)
mettl24 LOC107738893 other downstream 65431 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other downstream 96790 25326508 ~ 25377416 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other downstream 622427 24838652 ~ 24851779 (-)
G141651 NA other downstream 826785 24571413 ~ 24647421 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 941843 24524069 ~ 24532363 (-)
G142058 NA other upstream 51680 25648492 ~ 25650093 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other upstream 150855 25747667 ~ 25754008 (-)
LOC122324466 samd15 other upstream 454017 26050829 ~ 26054469 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other upstream 491603 26088415 ~ 26096971 (-)
G142281 NA other upstream 588848 26185660 ~ 26187919 (-)

Expression


Co-expression Network