G142157


Basic Information

Item Value
gene id G142157
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26048471 ~ 26054584 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU209928
AGACAACATCCCGAGaacatttcctttttcttcgtgcataaaatattaataacgtTACAAGAAGGTTCCGTGAACACTACCCTATTTACATAAGCTTTAAGAAGCAGCTCTGTCTCTCGGAGGAGTCCTGGACGCCTGGAAACAGAGGGGTATATTTAGGCACATTcgtgaaaacattttcaaaaattgatGCTTTGCTTTTTACCGGCCGTGCATCGGATCAAAGGCTGTCTGAACGCGTCTCTACCGGCCCGAAACGACGCTGACGCGCTGAAGGGTTCGCTTCAAATCCCCGGAGCTCAAAAATCAACCAATTACCGCCTAAAGAGCCCGACttcacgcgcgcgcgcgcccaCGACGCTCCCGAACGCTTCTTACTGAAGCGACCCTTTTCTGAAAAACGCAACGTGTCCGAAGGCCGGTCCTCCGCTCGGATCCGCGGCCGTCCGTTCCCGGTGGAGCGCGAGCCCGCGGACGCCTCGCGCGCCACGCGACGCCACGCCACGCGACGCGACGCGCACCCTCCACGCGCGGCAGGTGAAGGCGGTTTGTGACCTTGCAGATGTTCGTTAAACGCCTCGTTCTCTCTCGCACCTGTCCTCGGGGGTCCGCTCGGTAAACCGGAGGCGCCCGCGGACGCGTTCCGGAGGAGCGTCGGAGGATCGTCGCATCGTTTACCTGTAGAAGATATCCGCTTCGCTTCGAAGGGGCAAAGCGCGCCGTGTTTCCACCCAGATCACCGCATTTTCAGCAGCTCCTTCCTTCTGATGACCCAGATAGATCAGCGGGCGTCGGATGCTCCCTCATCAGGACCGACGCGCTTCCAGATGCCCATGACCGACGCGCGCGCGAGCGGGGGATTAAACGCCGTCCTGTAACGTATGAGACGTTCATTAGGAGCCTCCTTTAATGAAAGCGCAGACAGAAGCTCCGGCCGGGATCGCCTCTCCGCATTACGCCTGCATGCACCCAAATTACCAATCCTAGTACGGCCTGGGctgagctcatgaatattaagtgGGCGGCGCCACGGCCTTCCAATCGAACGGCGCGTTCTGGAATATTAATCAAGCGCGCTGACGTCGAGACGTTTCCCTCCTATAGCGATGGATTGTTCGAAGACTTTTCgttctttatttcttcatatcatttattttttgtagcaGTAGCCAACAAAACACTGCACGGGACACAATTatacatttctcttttatgccaaaaatcggTAGTATATTAAgtgaagatcatgttccatgaagatattttgttatatttcctgtcgtaaatatttattattattattattattattattattattattattatatgcattggacttcatttgaaaaacattaaaggtGAATTTATCAGTTTTTACAGATTCCAGATACATTTCTGAATATCGTCCTCTCCTAAAACACATCGAGGGAAAGATGATTTATTCCGTttcttttatcaaaataatgaaTCCTTGGGGCTGGTTTTCTGATCCCGGGTCACATATCTCCTGGTTTAAAGAATGAAAACTTGACAAATCAgtaaggaagtgtcttacaaaacACTAAAAGCCTGTTTAGGAAAGATTCAAACTTAATATTTCCTGTGATATCGATGAATATTGTGGTGTAGGAAAagaaagtatttacattttggaAGGATTTGTAATTCTACGTCAGCAGATAAATGAAGTGTATAATAGAAAAGTGTGcaattaatgtgtgtttttaatacagaaaaaagaagcgtattatagatttttttctataaggaaaatattatatacataggATGAAGTGGGTTCAGTATAGatcaaaatgtttcattataacaaataataatttaattataaattatgcaacaaataaaacaaaaaaatgctattcgtaagttattgtatatttttttgtgtgctagtggtagtatataaatatattctttttactgttttgctgcTATGCATTTGACTGTATAAATCCTAACATTATTACgctgttatataatattaatttaaattgttgaCGTAATGTTGTCGTCTAATGGGAAAGCGCGCCTCTAGAATATTAACGAGGCCGATGACGTCGAGCGCTTGTCCTCCAATGGGAGCGCGGGTCTCATGAATATGAAGCAGCACGCCCTCGCCGTAGTAGGGTTCGTAAACTCGCCAGCGGTTCGTCGAGAAAACGCCTTTGTGGAGACGAGAGCGACCTGCGAGGAATTCGGATCGGATCTCAGTCCGATGCTCTGAGAAACAAACACTCACGAAGGATCCGAGCAAAGAAGCGGCTCTGCagaagatgatgaagaggatgaaGATGGAGTCCCGCTCTTCTGAGAGAATCTTCTTGGCTCTTGTTCTTGAGGAACCGCTCATAAGTGAAGGACTCTGTCTGCTGACCGCTCCGGCTCTTCATCTGCAGGAACAGCGTCCGGTCATCATGAAGAGGATCAGCCACACTCTGCTTCCAGAGACGCTCCGAGACGCCCAGCAGCCCTCTGACCTGAGCTGAGATCAGCTGACACACACCAGAcatgtgtgagagtgagagagagtgagtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgagtgtgtgtatgagtgtgtgtgtgtgtgtgttttgagggCCTCTACCTTCATGTGCTGGAAGTCGGTGATTCCTAGTCGTGGTAGATTGAAACAGTTGACGTGAATCAGTTTTCTGCCCGTGATGTGATTCTGAGTGAAACACTCCTGAAGAAGGAAAGGTCTTTAATGAGTCCTGAACACATTCTCAGAGTTACAAAGAAACATAAGACTTTCATCTAAGGTGTCCTGGTTACAGTGCAGGTTATAATATTAACTGTATTTAGTTTATAGTTAGGGTTCCCATTTAGATTTGCTTTAAGGATGTATTTTAGATTACAATCTGTATCAAATACCACTGTAAGGTTCACCTGCTCTAAATGTTTGAAAACGATTCAAAGTTAgatttaaattaagaaaacgaatcaaaaatataatcaaagtAACCAAAATAATTACACTActtatcatattttaattatgctgATCTGTAACCTCCTGAACACGGCTTTCCAGGAGAATCTGAGCTGTTTTTCAGCTGAAAAGATCAGTGAGACGGGAATCAGAGCATCGTTTCTCTCAGACGGAGGTTGATTCTCGGCGGAGTCTGGCACGGAGGCAACAGATATCGCTGATGAAGGGAAGCCTGCGTTTTCCTTACGTGACGCTAACAAAGCACAAGCGGAGATGATGACGGAGCGAAAGCTGCTTCTCCACCGTCtgcagaggtcaaaggtcgcgTGTCCAGTACTCTAAACTCTACAGCACGTCGACACTAATTCATCTGTTGTTCTGTAGAATCCACTCGGGTCTGATCCTCGAGAACGTGAACGAAATAAAACATCTGCTTCTTACTTCTGCATTGTGAATAATTTCTCCTCGTTTactaactacatttaaaatatatgagaaGGGTTCACCTGATACTGAGAGAAACCAAGAGACTCGATCCAGAGAGAAACATCCTCACAGCTCCAGTGAAGGAACTCCATACTGTGCTGCTGCCATGGAAACcagacaacaaaacacacacacacacacacacacacacacacacgcacacagacacacactcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagaacacacacacactcacacacacacacacacacacacagaacacacacacacacacacacacacacacacacactcactcacacacacacacacacacacacactca
>TU209930
gtgtgtgtgtgtgtgtgtgtgtgtgagagagtgtgtgtgtgagagtgtgtgtgagagtgtgtgtgtgagagactgtgtgtgtgtgagtgtgtgtatgagtgtgtgtgtgtgtgtgttttgagggCCTCTACCTTCATGTGCTGGAAGTCGGTGATTCCTAGTCGTGGTAGATTGAAACAGTTGACGTGAATCAGTTTTCTGCCCGTGATGTGATTCTGAGTGAAACACTCCTGAAGAAGGAAAGGTCTTTAATGAGTCCTGAACACATTCTCAGAGTTACAAAGAAACATAAGACTTTCATCTAAGGTGTCCTGGTTACAGTGCAGGTTATAATATTAACTGTATTTAGTTTATAGTTAGGGTTCCCATTTAGATTTGCTTTAAGGATGTATTTTAGATTACAATCTGTATCAAATACCACTGTAAGGTTCACCTGCTCTAAATGTTTGAAAACGATTCAAAGTTAgatttaaattaagaaaacgaatcaaaaatataatcaaagtAACCAAAATAATTACACTActtatcatattttaattatgctgATCTGTAACCTCCTGAACACGGCTTTCCAGGAGAATCTGAGCTGTTTTTCAGCTGAAAAGATCAGTGAGACGGGAATCAGAGCATCGTTTCTCTCAGACGGAGGTTGATTCTCGGCGGAGTCTGGCACGGAGGCAACAGATATCGCTGATGAAGGGAAGCCTGCGTTTTCCTTACGTGACGCTAACAAAGCACAAGCGGAGATGATGACGGAGCGAAAGCTGCTTCTCCACCGTCtgcagaggtcaaaggtcgcgTGTCCAGTACTCTAAACTCTACAGCACGTCGACACTAATTCATCTGTTGTTCTGTAGAATCCACTCGGGTCTGATCCTCGAGAACGTGAACGAAATAAAACATCTGCTTCTTACTTCTGCATTGTGAATAATTTCTCCTCGTTTactaactacatttaaaatatatgagaaGGGTTCACCTGATACTGAGAGAAACCAAGAGACTCGATCCAGAGAGAAACATCCTCACAGCTCCAGTGAAGGAACTCCATACTGTGCTGCTGCCATGGAAACcagacaacaaaacacacacacacacacacacacacacacacacgcacacagacacacactcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagaacacacacacactcacacacacacacacacacacacagaacacacacacacacacacacacacacacacacactcactcacacacacacacacacacacacactca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209928 True 3842 lncRNA 0.45 6 26048471 26054584
TU209930 False 1328 lncRNA 0.43 3 26053123 26054584

Neighbor

gene id symbol gene type direction distance location
yy1b LOC107756049,LOC107704390,LOC107712210,LOC107659816,LOC107564321 coding upstream 17485 26024861 ~ 26030986 (+)
LOC122324854 LOC107575530 coding upstream 54377 25982812 ~ 25994094 (+)
LOC122325520 LOC107712196,LOC107659793,LOC107564338 coding upstream 68093 25979467 ~ 25980378 (+)
LOC122324467 LOC107564327,LOC107712204,LOC107659822,LOC107712203,LOC108411733,LOC108258090 coding upstream 105186 25939571 ~ 25943285 (+)
lamp5 lamp5,zgc:165600,LOC107704368,LOC107557889 coding upstream 159622 25879511 ~ 25888849 (+)
entpd5b entpd5b,LOC107756050,LOC107704388 coding downstream 537 26055121 ~ 26069045 (+)
LOC122324376 clg18h14orf37,cunh14orf37,c25h14orf37,LOC107574488 coding downstream 131092 26185676 ~ 26194962 (+)
prpf39 prpf39,LOC107704382,LOC107659803,LOC107713858,LOC107567385 coding downstream 163995 26218579 ~ 26229745 (+)
faua fau,LOC107557010,LOC107567395,LOC107659798,LOC107717644,LOC107704371,LOC105017549 coding downstream 176202 26230786 ~ 26234218 (+)
trnas-gcu_31 NA coding downstream 503099 26557683 ~ 26557764 (+)
G142145 NA non-coding upstream 80135 25967720 ~ 25968336 (+)
G142133 NA non-coding upstream 85851 25943346 ~ 25962620 (+)
G142119 NA non-coding upstream 86999 25911376 ~ 25961472 (+)
G142139 NA non-coding upstream 94300 25953800 ~ 25954171 (+)
G142107 NA non-coding upstream 154754 25891158 ~ 25893717 (+)
G142086 LOC107756052,LOC107575297 non-coding downstream 20547 26075131 ~ 26076630 (+)
G142104 NA non-coding downstream 22518 26077102 ~ 26078124 (+)
G142087 NA non-coding downstream 25597 26080181 ~ 26083938 (+)
G142095 NA non-coding downstream 48227 26102811 ~ 26134775 (+)
G142163 LOC107567392,LOC107567390,LOC107659807 non-coding downstream 69308 26123892 ~ 26124310 (+)
G142123 LOC107756040,LOC107704367,LOC107712211,LOC107564320,LOC107659815,LOC108257655,LOC108411613 other upstream 9263 25916034 ~ 26039208 (+)
evlb evlb,LOC107756048,LOC107704391,LOC107564322,LOC107659817,LOC103152656,LOC105929101,LOC106954543,LOC106922124,LOC107090853 other upstream 24239 26003763 ~ 26024232 (+)
LOC122325160 LOC107564323,LOC107659819 other upstream 45548 25996414 ~ 26002923 (+)
LOC122324336 LOC107564333,LOC107557900,LOC107659797,LOC107712192 other upstream 219556 25776475 ~ 25828915 (+)
fig4a fig4,fig4b,LOC107667833 other upstream 737044 25250898 ~ 25311427 (+)
G142173 NA other downstream 180837 26235421 ~ 26257234 (+)
G142333 LOC102197881 other downstream 423967 26478551 ~ 26479201 (+)
G142416 NA other downstream 848663 26903247 ~ 26905157 (+)
LOC122325079 dlg4,LOC107556052,LOC107662062,LOC106563427,LOC106603100 other downstream 917661 26972245 ~ 27093757 (+)

Expression


Co-expression Network